Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03152 CCGCAGCCCACTCTCCTCCCTCGTTTTTCACCTCCCCTCTCTCCATTCATATATATATATACCAAACCCAAATATAATATAATATTATATATAAATCTGTATGAAGCTCCAATATTTACTGCCACGGACTTGTTGATTGTTCTTATCCCCAGTACTACCTTGCATTTTTTTGTAATATGAGGATGAATCTTTACGTTTAGTGCTCGTAAGAAACTTTAATGTGTAGAACTGTATCTGATGATTTCAACGAAAAATAGTGTTTGGTTTATCCGGTATTTGTTCCAATTCAGTTTGGATCAGCAAACTAGCTTCTTTTTCTCTTAAATATCATAAAGCTTTCATTTTGTTCGAGATATTAACTTATAACCGAGAACTGGATTCATGTGAGCTGGTTAATGGAAGATTTTTACAGATTAAACCCTCTCGTATCTTACCCAGATGATGTTGTTAGAGTTGGCAACGTTTCAGCAGCTGCTACGGCTACTGCTACTCAATTGCTTCATGAACCAGTGGCCAATAACTATCTACAACTTGAACCGGATGGAACCGGGTCAGATATGTCGGATCGGTTGATCAAGAACCAGATCGTCAATCATCGTCTTTATCCAAATTTAGTATCTGCATACATAGAATGCCAAAAGGTTGGAGCCCCCCCAGAACTGGCGTCCCTTCTCGACGAAATAGGCCGCGAAAACCATCCTACCAATACTTGCTGTGTGATAGGGGACGACCCTGAGCTTGACGAGTTCATGGAATCATACTGCGAAGTTCTTCATAGATACAAGGATGAGCTGTCCAAGCCGTTCAATGAAGCGACTTCATTTTTGAACAATATCCAATCCGAACTAAGCAACCTTTGTAAGGGAACATCAACAATGTCATCGGACTATCGCTCAGATGAGGCAATTGGGACTTCTGAGGAGGAATTAAGTTGTGGGGAGGGGGGAACTCTTGAAAGTCGTGAATCTTATGGCAGTCGTCCGGGTGATCAAGAGCTTAAAGAAATGCTCCTTCGCAAGTACAGCGGATATCTCAGTAGTTTGAGAAAGGAATTCTTGAAGAAAAGAAAGAAGGGTAAGCTACCAAAGGATGCAAGGATGGCGCTACTGGATTGGTGGAACACCCACTACAGATGGCCATACCCTACGGAAGAGGAAAAATTGAAGCTTTCAGAGATAACTGGACTAGATCAAAAGCAGATCAATAATTGGTTCATCAATCAGAGGAAACGGCATTGGAAACCTTCTGAAGATATGAGATTTGCCGTTATGGAGGGTGTAACTGGTGGTAGCGTAGGAGGACCTATGTACTTAGATTCTGGAGGTGGACCTCAATTTGGTGATGTCTGAATGTTGCCTGCTCGTGTGTGATCTGATCTACTGTACCTTAATTCAAGAGTAATGTGTTCTTGGTAATTAGTTGTTCTTGCATCAGTCACTCTCTTGTGACAATGCTATGCCGAAGGAAAAGCAAAAGCGTCTCTCTAGAGTCCTGGAGGTACTCAATTTTAGTTTTGTAGACCTGGAAGGATGTAAAATATGCAGCACACGTAGCAAGGCGTTCCTTTCCTTGTATTAACTATGAACTACTTTGTTGAATTGTACACGAATGTAGTTTTGTACAATTTGCAGGATGGTTCTTATAGCT 1647 0.4129 MEDFYRLNPLVSYPDDVVRVGNVSAAATATATQLLHEPVANNYLQLEPDGTGSDMSDRLIKNQIVNHRLYPNLVSAYIECQKVGAPPELASLLDEIGRENHPTNTCCVIGDDPELDEFMESYCEVLHRYKDELSKPFNEATSFLNNIQSELSNLCKGTSTMSSDYRSDEAIGTSEEELSCGEGGTLESRESYGSRPGDQELKEMLLRKYSGYLSSLRKEFLKKRKKGKLPKDARMALLDWWNTHYRWPYPTEEEKLKLSEITGLDQKQINNWFINQRKRHWKPSEDMRFAVMEGVTGGSVGGPMYLDSGGGPQFGDV 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03152 317 SUPERFAMILY Homeodomain-like 222 292 IPR009057 -
Bach1g03152 317 Pfam KNOX1 domain 60 101 IPR005540 GO:0003677|GO:0005634
Bach1g03152 317 ProSiteProfiles 'Homeobox' domain profile. 220 283 IPR001356 GO:0003677
Bach1g03152 317 CDD homeodomain 232 284 IPR001356 GO:0003677
Bach1g03152 317 ProSiteProfiles ELK domain profile. 200 220 IPR005539 GO:0003677
Bach1g03152 317 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 71 290 - -
Bach1g03152 317 SMART ELK_2 200 221 IPR005539 GO:0003677
Bach1g03152 317 SMART HOX_1 222 287 IPR001356 GO:0003677
Bach1g03152 317 Pfam KNOX2 domain 109 155 IPR005541 GO:0003677|GO:0005634
Bach1g03152 317 SMART KNOX2_2 105 156 IPR005541 GO:0003677|GO:0005634
Bach1g03152 317 Pfam ELK domain 200 221 IPR005539 GO:0003677
Bach1g03152 317 Gene3D - 218 291 - -
Bach1g03152 317 Pfam Homeobox KN domain 240 279 IPR008422 GO:0003677|GO:0006355
Bach1g03152 317 ProSitePatterns 'Homeobox' domain signature. 258 281 IPR017970 GO:0000981|GO:0006355
Bach1g03152 317 SMART KNOX1_2 58 102 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03152 Bach-Chr1 40960419 40964988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03152 59 298 Homeobox Transcription Factor Family AT1G23380 55.285 9.69e-85 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Bach1g03152 KNOX2 2.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03152 - - qsa:O6P43_011033 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00234 8 1536539 1540891 Bach1g03152 1 40960419 40964988 BWGD
Bach1g03152 1 40960419 40964988 Bach1g03152 1 40960419 40964988 ECH