LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach1g03125	ATGAGGGGACCGGTGTACCTTAAGGCCACAAGCATCATAGAATCTGCCGAAGAAATTGGGAACAAGTTGTTTTTTGTGGTAGCACTGCCAGAGACGAGGAAAGGAAACCTCACCTTGAGAAAGACAGAAATGGATGATAGCTGTGCTGTCTGTGCTGATACACTTGAGTGGGTTGCATATGGACCATGTAGCCATCGCGAGGTCTGCTCAACATGTGTAGTTCGCCTTCGTTTCATCTGCGGTGACCGTCATTGCTGCATCTGCAAGTCAGAGTCCAACGTTGTTTTTGTGACCAAGGCTTTAGGAGATCATACAAAGATAATAAGTGACTTTTCAGTTTTTCCAGTCAATCCAACCGAGGGTCAAGTTGGATCATTTTGGTATCATGAAGGAACACAAGCATATTTTGATGACTTAGATCACTACAAGATTATTAAGTCCATGTGCAGGTTATCATGTGGTGTCTGTGATAAGATAAATGAACAGAAAATTAAAGGAACAAAGAGAACAGCAGAGTTCAAGAACATCGAGCAACTGAAGAGTCATCTGTACCATCGGCATAGGTTATTCATGTGTAATCTGTGCTTGGAAGGTAGAAAGATATTTGTAAGTGAGCAAAAGGTATATACTAAGACGCAATTGGATCAACATATAAAGACGGGCAACTCAGTGATTGATGGCAATGAATGTGAAAGAGGTGGATTCATGGGACATCCTATGTGTGAATTTTGCCAGAACCCGTTCTATGGAGATAATGAGCTGTACTCACATATGTCAACTGAGCATTATACCTGTCATATATGCCAAAGGAGGCACGCTGGCCAGTATGAATATTACAAGGATTATGACGACTTGGAGAGCCATTTTCGGGAAAAGCATTTTTTATGCGAGAAGGAGGAGTGTCTAGCAAAAAAATTTGTAGTGTTTGCATCTGAGTCTGAGTTTAAGAGGCACAATGCTGGAGAACACAAAGTATGCACGTCTCTTTCCAGGCACAATGCTGTTCTTCAGATACCAATTAGCTTGCGCTATCACCAAAGCAGCATGAACGATGGTCGAGAAAGAGAACATAATCATGATTCATGGGGTAATGGACGTTTTTGGGCTAATCAACCTTCTCTTAGCACAGTCAACGAAGGATACACCAATGGTGCTTCATCAAGTGCGCGAAGATTTCATAAAGTAAAGTCGACTGATACTGAGTCCAGTGGGAATTCATTTAACGTATTAGCTACTCTACAATCTGAGCCATCTTTGAGAAGCAACCTTACGTCAGAACAAAACTCCAGGAATAGGTTGCTGGAAGAATCTTCATTTCCTCCTTTACCTTCAGCTTCAAGAAGTGATCGACGTGAATCAAAAAGTTGTTCAGAAGAAATGGGGGAGACTACAAAGGTGTCTCGCCTTCATTGCCGAAACAATAAAAATGTTACTAATTTTACTTCTCGGGCTCAGCTCAACACGAGTATTCAGCCTATCTCATCTGCTAGCAGTTCTCACCAGCCAAGTTCGGTTGCTGATTATGGGTCTCTATCATTCTCAAATTCTCCCTGTTCTTCCCTGAGCAAATCTGCAACCGTTACTGAATCTATATCTTCTGCCCATTCAAGTGCCGCTAAGTTAAGCCTGTCTGCTTCTGCTTCAAACCCTTTGAAGAGAGAGTCATTGAAAAACACTATTTCTAAATCTAAATTTCCACCCACTTCTGTTACGGGTGATGATGAGGTTCGGTCAAGTAGCGTGCCAGTTCTGAAGATAGAAGATGCTCAGACTGCTAACAAGTTGCTGGTGGAAAAAATTCGTACTGCTTTAGATTTTGATGTTAACAAGCTCGCTGCTTTTAAAGAAGCATCTGCTGGGTATCGACGAGGTTCATTGAATATCAAGGAATTCCTCGCAAAGGTGCATGAATTTGGCTTGTCGCATCTTACTCTTGAGCTAGCTAGACTCTGTCCCGATGCACAGAAACAAAAAGAGCTCATTGAAACCTACAACCTTAATATGATGAGCAATCCGAAGGACAATAATCTGAGCAGTGACAGTGGTCAGCCAAAAAAGAAGAGTTCCAAGAAAGGTAAGGAAAAATGTGAGGACGAGAGAAGTTTTGCTCTGGCTGATAATTCCTTCAACTGTTTAAATACTTTGCAATACGAAGCTTCTGATAAAGAGTTGAAGAATTTATCTTGTGCCAAAGGCAAGTCAAAGGTATCAGTGGATGATGATGGAATGCGCAAGTCATCATGCAGCACACAAGTGGGGCTAGAGCAAATGAGCAAAAAGGTTTCCCAGTCAGGTGGTGGCTGCTTGAATAAAAATCAAGGGACGGAGGGAGCCGGAGGAGGTAACAAGCAACGGAAAAAGATCCCCAAATTCCTAAGGAATCGCCTTGGAAATGATGGTACTGCTATCTCAGACCTTGATGATTCTGATCCTGGACCTACTAATTGTCATGTACAACTGCAACGAATACCAGATAGAAATGAGGACTCTTCTCGACCCCTGCCACTACGTGGAGTTTGGCAGAACGGAGGAGGCACGAGATTAGTGGCCATGACGCAGATTAAACTCATAAAATAG	2577	0.4245	MRGPVYLKATSIIESAEEIGNKLFFVVALPETRKGNLTLRKTEMDDSCAVCADTLEWVAYGPCSHREVCSTCVVRLRFICGDRHCCICKSESNVVFVTKALGDHTKIISDFSVFPVNPTEGQVGSFWYHEGTQAYFDDLDHYKIIKSMCRLSCGVCDKINEQKIKGTKRTAEFKNIEQLKSHLYHRHRLFMCNLCLEGRKIFVSEQKVYTKTQLDQHIKTGNSVIDGNECERGGFMGHPMCEFCQNPFYGDNELYSHMSTEHYTCHICQRRHAGQYEYYKDYDDLESHFREKHFLCEKEECLAKKFVVFASESEFKRHNAGEHKVCTSLSRHNAVLQIPISLRYHQSSMNDGREREHNHDSWGNGRFWANQPSLSTVNEGYTNGASSSARRFHKVKSTDTESSGNSFNVLATLQSEPSLRSNLTSEQNSRNRLLEESSFPPLPSASRSDRRESKSCSEEMGETTKVSRLHCRNNKNVTNFTSRAQLNTSIQPISSASSSHQPSSVADYGSLSFSNSPCSSLSKSATVTESISSAHSSAAKLSLSASASNPLKRESLKNTISKSKFPPTSVTGDDEVRSSSVPVLKIEDAQTANKLLVEKIRTALDFDVNKLAAFKEASAGYRRGSLNIKEFLAKVHEFGLSHLTLELARLCPDAQKQKELIETYNLNMMSNPKDNNLSSDSGQPKKKSSKKGKEKCEDERSFALADNSFNCLNTLQYEASDKELKNLSCAKGKSKVSVDDDGMRKSSCSTQVGLEQMSKKVSQSGGGCLNKNQGTEGAGGGNKQRKKIPKFLRNRLGNDGTAISDLDDSDPGPTNCHVQLQRIPDRNEDSSRPLPLRGVWQNGGGTRLVAMTQIKLIK	858

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach1g03125	858	MobiDBLite	consensus disorder prediction	761	787	-	-
	Bach1g03125	858	MobiDBLite	consensus disorder prediction	668	696	-	-
	Bach1g03125	858	PANTHER	ZINC FINGER PROTEIN 598	44	749	IPR044288	GO:0061630\|GO:0072344
	Bach1g03125	858	ProSitePatterns	Zinc finger C2H2 type domain signature.	241	262	IPR013087	-
	Bach1g03125	858	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	31	103	IPR013083	-
	Bach1g03125	858	MobiDBLite	consensus disorder prediction	399	435	-	-
	Bach1g03125	858	MobiDBLite	consensus disorder prediction	799	838	-	-
	Bach1g03125	858	MobiDBLite	consensus disorder prediction	761	779	-	-
	Bach1g03125	858	MobiDBLite	consensus disorder prediction	668	683	-	-
	Bach1g03125	858	SMART	c2h2final6	239	262	IPR013087	-
	Bach1g03125	858	SMART	c2h2final6	294	323	IPR013087	-
	Bach1g03125	858	SMART	c2h2final6	151	187	IPR013087	-
	Bach1g03125	858	SMART	c2h2final6	263	293	IPR013087	-
	Bach1g03125	858	MobiDBLite	consensus disorder prediction	558	576	-	-
	Bach1g03125	858	MobiDBLite	consensus disorder prediction	558	577	-	-
	Bach1g03125	858	ProSiteProfiles	Zinc finger RING-type profile.	48	89	IPR001841	-
	Bach1g03125	858	MobiDBLite	consensus disorder prediction	379	470	-	-
	Bach1g03125	858	MobiDBLite	consensus disorder prediction	447	469	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach1g03125	Bach-Chr1	40803513	40807981	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach1g03125	44	845	C2H2 Transcription Factor Family	AT3G62240	42.586	0.0	594

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach1g03125	K22381		-	qsu:112024618	796.964