Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03119 TAGCCGCCTCCTTCATCATCTAAGTTTAAGTCTTCGTTTTCCTCATCATCAAGATCTGTGCGCAATGGGCGGAGGTGGAGCGACGCCGTATGCGGAGGCACAGTACGTCCCCGCCAAGACGTCCGTTTGGTGGGACATAGAGAACTGCCATGTCCCCAAAGGCTGCGATCCGCACGCCATCGCGCAGAATATAAGCTCAGCTCTCGTCAGGATAAACTATTGTGGGCCAGTCTCCATCTCCGCCTACGGTGATACTACTCGTATTCCGGCCTCTGTACAGCACGCCCTCTCTAGTACTGGAATCTCCCTCAACCATGTCCCTGCTGGTGTTAAGGACGCTAGCGACAAGAAGATTCTCGTGGACATGTTGTTCTGGGCTGTGGACAATCCTGCTCCTGCTAATTATTTATTAATTTCTGGTGATCGAGACTTCTCTAATGCTCTTCATCAATTGCGGATGAGGAGATATAATATTCTTCTTGCACGACCTCAGAATGCAGCTTCACCTCTTGTTGCTGCTGCTAAAAGTGTATGGCTTTGGACTAGTCTCTTAGCTGGTGGCCCTCCTCTACCTAATGGCGAATCACAACAACTTGGTAATAATAACTTCCTATCAAGTTCTGATACCTTCCAAATTCCAGTCTCTAATGGCGTTCAGATAAAGCAACACGTGGATTCCTATTCTGAAGTTCATATAGGAAATCAGAAATTCCCAAATGGGGGAAGATCATTTGATGCTAGATATCAGGGGAAAACAAACTGGAGAAACTCAAGTCAACCAAATGGAACCAAAGCTTCGAATCTGCCAGTTGGACTTCAAGAAAATCATAGCAATATTAGCTCGTATCGTCCTGGCAACTATAGCCCAAGTGTTTCCCTCAGTGGGTCCGCTCCAAATTTTGCTCAAGGCAATCACGATCATGTGTGGAGCAATAACAGCAATGTACAGGGCAATTATCAAAGTCCTTATTCACAGCCATTAAGACCTAATGGTCCTCCATTGCAACCTGCTTTTGCACAAAGTAATTCATATCCACCTAATTCCCATAATTTTGCTACTTCAGTTGTACCTTCTAGGCCTGGCGGACCCAGTTTCTCCTCAGGACCACATACAAAAGTGCCAGATATTAGAAATCTAAACATTTCTGGATATCCCAATAATGTTCTTGATCCTCATATTGTTCAGCAACGGAGTGGAGACATAAAACAGAATCCTAACAATAATGCTCCACATCCTGTGAGGTCAATTGAAGAACAAAACAGACATATGGTGCATAGCACACAACCATCATACCCTGGTCGTCCTCATGGTCCAGAATATCCACCTACATCTATGGCGCCAATGGGCAATAATAACCTTCCTGGTAATGGCATATGGGGATCTCCAGGATGCCCAAAACCTTCTGAATATGTCCAAGGCCTTATAGGGGTTGTGTTACTTGCCTTGAACACACTAAAGAACGAAAAGATAATGCCAACTGAAGCAAATATAACTGATTGCATACGTTATGGAGATCCCAAACACCGTCATACAGATGTTAAGAAGGCTCTGGAGAGTGCTATTGAACAGCAGATGTTGGTAAAACAGAATTTAGGTGCGCTGCAGTTTTATGTTGGAAAAAATGATAGACTTTGGAAGTGTGTAAATCCTATTGGTGGTAATCCTAAGCAGTACTCAAAAGAAACATGGGATGAAATTCAAAATTTTTTAACATCTTCTTCTGGACGGTCAGCAATGATGGCTACTCAATGCAAGTATGAAGCAGGTATTATACTAAAAGATATGTGCTTGAAAAATTTCAGTTTGGGTAATGTACTTCAGATTTTGAACATGGTTGTTACCCATAAAAAATGGATTGTGCATCATCAGACGGGATGGCAACCACTTAACATTGCTCTTCCTGAGACAAACAGTGATTCAGGGGTCATAGCTGGCACATAACTGCAGCCATAGCTGGTTGTGGTTATGGAAAGCCGCCTGGAGAAATCTAAATGGGTTACTGAATATATTAACGGCTGGTTGGATTAGTAATTATCAAATAAATTTAATTTCTCCAGCGTAACAAAGGTATGTAGTAATGATGAACTGTAGTTATTTAAGTAGCTTGATTGTTGCATCTTATTTTATGATTGATGGTAAAGAGCTTCAGTGTTCAGCTTGGGGGAGAAATGAAAGCAGTGTTTGGACATACTTGAAACATACAATTTACGATTGAGACATTGAGTTGCTTGCAGTTGCTGAGGTTACAAGTTTTCTTGTTGCTACTATGGCCTTCTATATTTCATAGTAGATCAATCTTGGAATTAGAATATGCTCCTTCGTATTCTTAGACTTCTGCCCGTCTTTATCTTCCCGTGATTTATTTGCTTGGAGATTCATGTATTGGACTGAATTCCTTGGTTGTTTCGATTGAAGCCTCCTATAAAGCATCCAGGGTATGGCCAAATGTGTCTTGCTGCTGGAAATAAGCAATATAGACACCTTCAAGGAAGTTTGTTAAAAGATCAACTCAGATTGTTCAGGGACTAGTGAAATGAGAGTCCACGAACTGTGGAATCACCTTTTGTTCATTGATGTATCTTCAAGTTCTGGGAGGAAACTTAACAACTACTGGACAGATAATACACTTAAAATGCTCAAGATTTAAGGATACTGCAATTTTATTAAGTACCGCCACGAAGCTCTTGATTTGCTATTTTACTGGTGGTGGAAATTGACCATG 2723 0.4168 MGGGGATPYAEAQYVPAKTSVWWDIENCHVPKGCDPHAIAQNISSALVRINYCGPVSISAYGDTTRIPASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLARPQNAASPLVAAAKSVWLWTSLLAGGPPLPNGESQQLGNNNFLSSSDTFQIPVSNGVQIKQHVDSYSEVHIGNQKFPNGGRSFDARYQGKTNWRNSSQPNGTKASNLPVGLQENHSNISSYRPGNYSPSVSLSGSAPNFAQGNHDHVWSNNSNVQGNYQSPYSQPLRPNGPPLQPAFAQSNSYPPNSHNFATSVVPSRPGGPSFSSGPHTKVPDIRNLNISGYPNNVLDPHIVQQRSGDIKQNPNNNAPHPVRSIEEQNRHMVHSTQPSYPGRPHGPEYPPTSMAPMGNNNLPGNGIWGSPGCPKPSEYVQGLIGVVLLALNTLKNEKIMPTEANITDCIRYGDPKHRHTDVKKALESAIEQQMLVKQNLGALQFYVGKNDRLWKCVNPIGGNPKQYSKETWDEIQNFLTSSSGRSAMMATQCKYEAGIILKDMCLKNFSLGNVLQILNMVVTHKKWIVHHQTGWQPLNIALPETNSDSGVIAGT 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03119 625 CDD PIN_limkain_b1_N_like 18 142 - -
Bach1g03119 625 Gene3D - 13 161 - -
Bach1g03119 625 PANTHER LIMKAIN B LKAP 17 504 IPR024768 GO:0005777|GO:0010468
Bach1g03119 625 Pfam NYN domain 18 154 IPR021139 GO:0004540
Bach1g03119 625 Pfam OST-HTH Associated domain 561 617 IPR025677 -
Bach1g03119 625 MobiDBLite consensus disorder prediction 314 344 - -
Bach1g03119 625 MobiDBLite consensus disorder prediction 211 353 - -
Bach1g03119 625 MobiDBLite consensus disorder prediction 228 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03119 Bach-Chr1 40755663 40759077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03119 10 271 C2H2 Transcription Factor Family AT5G61190 56.981 2.03e-84 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03119 - - gmx:100794608 1006.51