Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03116 ATGGAAGTGGAAATGGACGAGATAACAGAGAGGAAGGGTTTGATTACCAACTTGATCACCATAGGGATTTCCATGGCGGTGATAGCAGCAGTCACCATTTTTACTCTTTTCGGCGCCGATATCTCCGATCAAGGCGCCGGAACTATTAAGCCCCTTTTATCAATTTGCAGCAAAACTGGGTATCTGGAAAACTGCTACCGTTCCCTACAATATGCAGGAGAGAGAGGCACATCTATGCATTATATAAGGGCTTCCATTAATGTAACTCTTGAAGAAATGAAGGTGGTGGCAGCGCCTAAACCTGCCATTTCAAACCGCTCTGAGACACTGCAGGCGCTGACATATAGAGATTGCACGGAATTGTTGGATCTGGGTATTGATGAACTTGAATCCTTGTATAACAAGGCATGTTCTATCGATAAATTGTCCAGATTTAATCTAGATGATGCTATCAAGAGCTTGAGTGCTGTCATTTCATACCAACAAATTTGCAATGATGCCTTGCTGCAAACAAATAGCTATGAAACTCTAGGGTATACCTTGCAGATGCCGATTCTGCTCACAAGGATAACGTTAGCAATTGTTGATGGCTTCTCCGACAAAAGGGACGCTGGGGATGTTCATGCATTTGGATTCAACTCCCGGAGACTCTTAGCTGCGGTTGAATTGGGAAACTATCCAATATGGTTCTCGCCAGCTGATCGGAAACTTTTAGAGTCTCAAAGAGAGCAGCCAAATGCAGTGGTGGCTCAGGATGGAAGTGGCCAATTTTCAAGCATAACAGAGGCAATCATGGCATGCCAAAAGTACAACATGGGCTCATGTACTATTTACGTCAAACAAGGAAAATACGAGGAGAAAGTAGTTATTCCAAAGAATGTAAATCAAGTATTCATGTATGGTGATGGGTGTGACAAAACCGTTGTCACTGGTGCCAGAAACAGGGGAGACAAGAACATTACAACCTTTGAGGCAGCTACTTTCACGGCAATTGGTAGTGGATTCATCTGTAAAGATATGGCTTTTATTGCCCCACTTGACATCGATGCAGCACCAGCAATCCTTGTCCTTTCGGATCGTTCAGCATTCTTCAATTGCAAAATACAAGGTGAGGAAGGAAGCTTATTTGCAGCAGCCAATAGACAATTCTACCGAGACTGTGAGATTCGTGGAAACGTAGACATCATTAAGGGAGACTCTGCAACTGTAATTCAGAATTCAGAAATCATCGTGAAGAAACAGAATGGTTGTGCTGATTGTGTGAAGCCAAATGTTGTGAGCGCACAATTAAGGTCTGATAAGCATGAAAGTACTGGGTTTGTTATCCAGAACTGCAGCATCATTGCAGACAAGGGATACACAAACATCAAGCTTGGCAATGCCACTTACTTGGGGGCTCCATATAAAGAATACTCAAGAACAATCATAATGGAATCGTTTCTGGCAGATTGTGTACATCCAGAAGGATGGTATAAATGGAGTGACGACTATGGCACTCAAACAGCAACTTTCCTCGAGTATAAAAACCTAGGGCCTGGGGCCGTAACTGAGAAGAGGGTCAATTGGCAGGGCCATGATACAATTACTAATCCAGATCAAGTCGCAATCTACACTGCTGGACAGTTTATCCAAGCAGATCAATGGTTGCCAACTTCAGGTTTCCCATACATATCTGGATTTGTATCTTAA 1689 0.431 MEVEMDEITERKGLITNLITIGISMAVIAAVTIFTLFGADISDQGAGTIKPLLSICSKTGYLENCYRSLQYAGERGTSMHYIRASINVTLEEMKVVAAPKPAISNRSETLQALTYRDCTELLDLGIDELESLYNKACSIDKLSRFNLDDAIKSLSAVISYQQICNDALLQTNSYETLGYTLQMPILLTRITLAIVDGFSDKRDAGDVHAFGFNSRRLLAAVELGNYPIWFSPADRKLLESQREQPNAVVAQDGSGQFSSITEAIMACQKYNMGSCTIYVKQGKYEEKVVIPKNVNQVFMYGDGCDKTVVTGARNRGDKNITTFEAATFTAIGSGFICKDMAFIAPLDIDAAPAILVLSDRSAFFNCKIQGEEGSLFAAANRQFYRDCEIRGNVDIIKGDSATVIQNSEIIVKKQNGCADCVKPNVVSAQLRSDKHESTGFVIQNCSIIADKGYTNIKLGNATYLGAPYKEYSRTIIMESFLADCVHPEGWYKWSDDYGTQTATFLEYKNLGPGAVTEKRVNWQGHDTITNPDQVAIYTAGQFIQADQWLPTSGFPYISGFVS 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03116 562 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 198 IPR035513 -
Bach1g03116 562 Pfam Pectinesterase 246 546 IPR000070 GO:0030599|GO:0042545
Bach1g03116 562 Pfam Plant invertase/pectin methylesterase inhibitor 54 170 IPR006501 GO:0004857
Bach1g03116 562 FunFam Pectinesterase 4 243 560 - -
Bach1g03116 562 SUPERFAMILY Pectin lyase-like 244 559 IPR011050 -
Bach1g03116 562 SMART PMEI_2 47 194 IPR006501 GO:0004857
Bach1g03116 562 Gene3D Invertase/pectin methylesterase inhibitor family protein 51 198 IPR035513 -
Bach1g03116 562 PANTHER PECTINESTERASE 31 551 - -
Bach1g03116 562 CDD PMEI-like_3 54 199 - -
Bach1g03116 562 Gene3D - 244 562 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03116 Bach-Chr1 40745363 40747161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03116 6 562 Carbohydrate Esterase AT3G05610 34.370 8.43e-105 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03116 K01051 - gmx:102665007 562.377