Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03111 ATGCCTCTCAACGAGTTATACCGGCTGGCTAAAGCGAAGCTTCATTCGGAAGAAATAAACACCACATCTGCACCTGATCAATCTTCTGTACCCGAGAATGATTTTTTTGAGCTGGTTTGGGAAAATGGCCAGATTTCGATGCAAGGTCAGTCCAGCAGAGCTAGAAGGAGCCCTATTTCTAGGAGTTTACCATCTCACTGCTTACCATCTCACAGTCCCAAGGGTCGAGATAAAGATGCAGGACATGGTGGCAATACAAAGATGGGAAAGTTTGGGGATTTTGATTCTGGATTGAATGATATTCCAATCTCAGTGCCATCAGTTGAAGTGGATTTGAGTCAAGAAGAAGACGTGATACCTTGGCTCAATTATTCAATGGATGAATCTTTGCAACATGAATATAGTTCTGATTTCTTGCAAGAATTATCTGGGGTCACTGGAAATGATCTGCCTGCCTCAAATAGTTTTCCCCTAATGGATGAAAGAAATAGTTTTAATCAGGTTTTGAGGGACTCTCATAAAAATTCCGTTTCCGTGCGTGATGTCTCAAATTCAGAACAAGGGAACGTTTCCAAGGGTTTTTCGGCAGGAGGAGTTGAGGCCACTAGACCAAAAGCTAGCACAAGTCAGTTATACACACCATTTTCGCAGCAATGTCAAACATCATTTACTTCCGTTAGATCCAGATTATCAGATGCCACAAAAAATAATACGAGTAATGCAACCCAGCATGCACCACCTTCCTCCAGTGATTTTTCTGGCTTAAAGTTGCAGAAGCAAGGTTCAGTTACACCTAGCAATAGTTCCTCTGTAATGAATTTCTCCCATTTTGCAAGACCTGCTGCTTTAGTTAGAGCTAATCTTCAGAGCATTGGTTTGGTGGCTGGCTCTTCAGCAAGATCAGAAAACATGGGAAATAAAAAGAAGGATACTGGTGGAACTAGCAGCAATCCTACCGAATCAACCCTCATTGATTCAAGAGGTGAATGTCTCAAGGAGTCAACTAGGTATTGCCAGCAGCCTATGGAGCCTTTCAAGGCTGATTTGAAACCTTTTGAGCCAAAATCTCTTGAACAGAATCCTGTTGCTTCTAAACAGTCTGACCCTGTCTGTAAAAAGGATGTCTTTAAAACTGATCAAACTTCCAATCTGGTTGTTGCTGAAAGTTCCGCTAAAGGACAGACAGCTGTTGGAAAAAATATGGAGCCGTTAGTAGCCTCTTCCTCTATGTGCTCTGGCAATGGTTTGGATAGAGGTTCAGACGATGGAAATCAAAATTTGAAGCGAAAAAGTAGAGATGCTGAGGAATCTGAGTGCCACAGTGAAGATATTGAGGAAGAATCAGTGGGTGTTAAAAAGGTACCTGCGCGACTCAAGAGAAGCCGTGCAACTGAAGTGCATAATCTATCTGAAAGGAGGCGAAGAGACAGGATAAATGAGAAGATGCGTGCGTTACAAGAACTCATACCTAACTGCAATAAGGCGGATAAAGCTTCAATGCTTGACGAGGCAATTGAGTATCTTAAAACACTTCAGCTCCAAGTTCAAATGATGTCAATGGGAGCTGGTTTATATATGCCTCCAATGATGTTACCACCTGGAATGCAGCACATGCATGCACCTCATATGACTCCATTTTTTCCTATGGGTGTTGGCATGCAAATGGGGCTAGGAATGGGTTATGGGATGGGTATTCCTGACATGAATGGCGGACCTTCCAGATTCTCTATGGTTCAGGTGCCTCAAATGCAAGGAACTCATCTCCCTATTCCACCAATGCCTGGACACACTGCTATACATAGGATGCCTAGATCAAATCCTCCAGGCTTCGCGTTTACTGGTCAGGGACTTTCCATGCCAATGCCACATGCTCCAATAGTTTCTTTGTCAGGCGGGCATCTTATGAACTCACCTGCTCTAGGACTAAATGCCTGTGGAGCTGCAGGACTTATGGGAAATGTGGATTCGGCTTCATCCTCCGGCTTGAAGGATCCAACGTCAAATTTGAACTCACAAGTTATGCAAACCCCTGGTGGCAGTAACCCAACAAGTCAGATGCCTAACCAGTGTGAAGCAACAAATGTTGGGTTTGAACAGTCTCCTTTGACTCATAATAATGGTCATCCCTCCAGCGTCAATGGCAATGGAGCTGTGAATCCTGGTAAAGAAGATAACCCTGTGATTGATAAATGTTGTGAGTAAGCATCAATAGATACCCATCTATGGATTTCAACTTATTTGATATTCCGAGTTAATGGGAAGGTTATGATGGTTGATGAAAAGAATCCAATTTTTCGGATTAGTGAGTCTAAACCCTTTTGCTAATGTCTCATCTCTGCAAGTTCAACTTCGAATACGACAGAGAATCAGAGCCGCTGGGCTCAGACCCTTCACAATAACTATCAGAGTTCTAATTTCTGGACTTTACAATCACATAGTTGCACAAATTTTGCTATCATTGTAGACGGCACTCCTTTGTACATTCACTTAGAGACATGTCCAATCAATTGTTGTTAAAAATTTACATATCCTAGATATATTCCGATGTTTGTGTCGGACCTTTCATAGTGATTCTTTCTGTCAATGCAATAATAGTT 2597 0.4236 MPLNELYRLAKAKLHSEEINTTSAPDQSSVPENDFFELVWENGQISMQGQSSRARRSPISRSLPSHCLPSHSPKGRDKDAGHGGNTKMGKFGDFDSGLNDIPISVPSVEVDLSQEEDVIPWLNYSMDESLQHEYSSDFLQELSGVTGNDLPASNSFPLMDERNSFNQVLRDSHKNSVSVRDVSNSEQGNVSKGFSAGGVEATRPKASTSQLYTPFSQQCQTSFTSVRSRLSDATKNNTSNATQHAPPSSSDFSGLKLQKQGSVTPSNSSSVMNFSHFARPAALVRANLQSIGLVAGSSARSENMGNKKKDTGGTSSNPTESTLIDSRGECLKESTRYCQQPMEPFKADLKPFEPKSLEQNPVASKQSDPVCKKDVFKTDQTSNLVVAESSAKGQTAVGKNMEPLVASSSMCSGNGLDRGSDDGNQNLKRKSRDAEESECHSEDIEEESVGVKKVPARLKRSRATEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQMMSMGAGLYMPPMMLPPGMQHMHAPHMTPFFPMGVGMQMGLGMGYGMGIPDMNGGPSRFSMVQVPQMQGTHLPIPPMPGHTAIHRMPRSNPPGFAFTGQGLSMPMPHAPIVSLSGGHLMNSPALGLNACGAAGLMGNVDSASSSGLKDPTSNLNSQVMQTPGGSNPTSQMPNQCEATNVGFEQSPLTHNNGHPSSVNGNGAVNPGKEDNPVIDKCCE 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03111 733 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 460 524 IPR036638 GO:0046983
Bach1g03111 733 MobiDBLite consensus disorder prediction 406 451 - -
Bach1g03111 733 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 462 511 IPR011598 GO:0046983
Bach1g03111 733 MobiDBLite consensus disorder prediction 47 67 - -
Bach1g03111 733 Coils Coil 427 447 - -
Bach1g03111 733 MobiDBLite consensus disorder prediction 297 324 - -
Bach1g03111 733 MobiDBLite consensus disorder prediction 406 421 - -
Bach1g03111 733 CDD bHLH_AtPIF_like 462 524 IPR047265 -
Bach1g03111 733 Gene3D - 458 520 IPR036638 GO:0046983
Bach1g03111 733 MobiDBLite consensus disorder prediction 176 214 - -
Bach1g03111 733 Pfam Helix-loop-helix DNA-binding domain 466 512 IPR011598 GO:0046983
Bach1g03111 733 FunFam Basic helix-loop-helix transcription factor 457 520 - -
Bach1g03111 733 MobiDBLite consensus disorder prediction 226 270 - -
Bach1g03111 733 MobiDBLite consensus disorder prediction 422 451 - -
Bach1g03111 733 MobiDBLite consensus disorder prediction 47 93 - -
Bach1g03111 733 MobiDBLite consensus disorder prediction 176 192 - -
Bach1g03111 733 MobiDBLite consensus disorder prediction 656 718 - -
Bach1g03111 733 MobiDBLite consensus disorder prediction 656 733 - -
Bach1g03111 733 PANTHER TRANSCRIPTION FACTOR PIF3 1 686 IPR044273 GO:0003700|GO:0006355
Bach1g03111 733 MobiDBLite consensus disorder prediction 297 325 - -
Bach1g03111 733 SMART finulus 468 517 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03111 Bach-Chr1 40695164 40698751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03111 1 584 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 35.655 6.76e-74 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach1g03111 HLH 1.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03111 K12126 - gmx:100794974 863.988