Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03099 CCGGTCTTCTTTTCACCCTATCCCCTGCAAAGTACAGTACTTCTTCCTCGGCACATTTCTTCCCAGCAAAACATCTCTCTCATATTCATTGTAGAGAGCTTCTTTCCTCATCCTCTTTGTGTTTGAAGACTTTCAGCGAACGCTTGGTGGTGTGTTAAAACAATTCAAGGGACTGAAAATCGAGGAGTGTGCTGAGTGCTTTTGCAAAAAGAAAATGGCTTCTATTACAGGTGTTTCTTCAATACTCCAGACTCCGGCTCTGGAACTATATAGACAGACCACCACAACGGGTACTCCGAATTCCTTTTCGTTGCAATTATCAGATAACAAGTCCCACTTTAACAACGTTTTGAGAGCTCATCTTAGTAATAGTTGTACTGGCAATTTCAAGAGTGGGTTTAAGCCGAGCGTTAGTTTCGTTCCTTCGGCTATTGCCACACCCAATTCTTCCATCCTTAGTGAAGAAGCTTTCAAGGGTATAGGTGGGGGATTTTCTGAAGATGATTCTTTGGGTAACTTCGGCTATGAGTCTGAAACTGAGGCCTCTGCTGCTGCTCCAGAGGACGAGCTCGACGTTTCCAAGCTGGGTTTGCCTCCGCGCCTCGTGGATTCACTTCAGAAACGCGGGATTACTCATCTTTTTCCTATTCAGAGAGCTGTGTTAGTACCCGCACTAGAAGGTCGAGATCTCATTGCCCGCGCAAAGACTGGGACTGGGAAAACATTGGCCTTTGGAATTCCAATTATTAAACGTCTCAGTGAAGATGAACGAAGTTCTCAGAGGAGGTCTGGTCGTCTTCCTAAAGTATTGGTCCTTGCACCTACCAGGGAGCTAGCTAAGCAAGTAGAGAAAGAGATTAAAGAATCTGCTCCCTTTCTAAACACAGCTTGTGTTTATGGGGGTGTTTCTTACGTTACACAACAAAATGCACTTTCACGCGGTGTTGATGTGGTGGTTGGAACTCCTGGTAGAATAATTGACCTAATAAATGGGAATAGCCTTAAACTGAGTGAAGTTGAGTTTTTAGTCCTTGATGAAGCTGATCGGATGCTTGCTGTCGGGTTTGAGGAGGATGTGGAAGTGATTTTGGAGAAGCTTCCATCTGAGAGGCAGAGCATGCTTTTTTCTGCAACCATGCCTGGTTGGGTGAAGAAATTGACGAGAAAACATTTGAACAATCCATTGACTATTGATTTGGTTGGAGAACAAGAAGAAAAGCTTGCAGAAGGGATCAAGCTTTATGCTCTATCAGCCACACCCACTTCAAAGCGGATAATTCTTTCTGATCTTGTAACAGTTTATGCAAAGGATGGGAAGACTATTGTCTTTACACAGACAAAAAGAGATGCTGATGAAGTCTCATTGGCATTAACAAATAGCATAACTTCTGAGGCACTGCATGGCGATATATCTCAGCATCAGAGAGAGAGAACATTGAATGGTTTTCGGCAAGGGAAATTCACTGTACTTGTTGCCACTGATGTTGCAGCTCGTGGACTTGACATTCCCAATGTTGATTTGGTCATCCACTATGAGCTTCCCAATGATCCTGAGACTTTTGTACACCGCTCTGGTCGCACTGGACGTGCAGGAAAAGAAGGTACTGCAATTCTGATGTATACCAGTAGCCAGAGGAGAACAGTTAGATCTCTTGAGCGTGATGTAGGATGCAAATTTGAATTTATCACTCCACCAGCTATAGACGAGGTTTTGGAGGCATCTGCTCAGCAAGTGGTTGCCATGCTTAACAGCGTTCATCCTGAGTCTGTTGAGTTTTTCACCGCAACTGCACAAAAACTAGTTGAAGAACAAGGGGCAACTGCCCTGGCAGCTGCACTAGCACAAATGAGTGGATTCTCTCGACCCCCCTCATCACGGTCTCTTATAAACCATGTGCAGGGTTGGATTACATTGCAACTGACTCGAGATTCAGATATCTCTCAAAGATTCCTCTCAGCAAGATCAGTCACTGGGTTTCTTTCTGATGTTTATCCTCCAGCTGCTGATGAAGTTGGAAAGATACATATGATTGCAGACGAAAGGGTTCAAGGAGCAGTTTTTGATCTTCCAGAGGACATCGCCAAAGAGTTACTGATAATGAATAAGGAAATACCATCTGGAAACACTATTTCTAAGATCAGTAAGTTGCCTCCCTTGCAAGATGATGGGCCTCCAAGTGATTTCTATGGGAAGTTTTCTGACAGAGATAGAAGTAGCCGTAGAGGTTCCAGGGATCAGAGAGGTTCTCGGAACTCCCGGGGATGGGATAGCCGCCGAGACTCGAATGACTTTGATGATTCACATAGGAGAGGTGGTCGAAGTTATAAAACTGCCAACAGCTGGTCTCGAACGGCAAGAAGTGGCGGGGATGATTGGCTAATTGGAGGTAGACGGTCAAGCAGTTCATCATCTGACAGGAGCTTTGGAGGGTCCTGTTTTATTTGTGGGCAATTTGGGCATCGGGCATCAGACTGTCCTAGCAAGCAAGAAAAAGACAGGAATACCTTTAAATCAATAGATTATGAAATTTCAAAGGTTATGGAACTGAGGAGGCCAAAGTAG 2563 0.4452 MASITGVSSILQTPALELYRQTTTTGTPNSFSLQLSDNKSHFNNVLRAHLSNSCTGNFKSGFKPSVSFVPSAIATPNSSILSEEAFKGIGGGFSEDDSLGNFGYESETEASAAAPEDELDVSKLGLPPRLVDSLQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKRLSEDERSSQRRSGRLPKVLVLAPTRELAKQVEKEIKESAPFLNTACVYGGVSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLKLSEVEFLVLDEADRMLAVGFEEDVEVILEKLPSERQSMLFSATMPGWVKKLTRKHLNNPLTIDLVGEQEEKLAEGIKLYALSATPTSKRIILSDLVTVYAKDGKTIVFTQTKRDADEVSLALTNSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSSQRRTVRSLERDVGCKFEFITPPAIDEVLEASAQQVVAMLNSVHPESVEFFTATAQKLVEEQGATALAAALAQMSGFSRPPSSRSLINHVQGWITLQLTRDSDISQRFLSARSVTGFLSDVYPPAADEVGKIHMIADERVQGAVFDLPEDIAKELLIMNKEIPSGNTISKISKLPPLQDDGPPSDFYGKFSDRDRSSRRGSRDQRGSRNSRGWDSRRDSNDFDDSHRRGGRSYKTANSWSRTARSGGDDWLIGGRRSSSSSSDRSFGGSCFICGQFGHRASDCPSKQEKDRNTFKSIDYEISKVMELRRPK 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03099 782 Gene3D - 347 546 IPR027417 -
Bach1g03099 782 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 272 280 IPR000629 -
Bach1g03099 782 CDD DEADc 130 327 - -
Bach1g03099 782 Pfam DEAD/DEAH box helicase 143 315 IPR011545 GO:0003676|GO:0005524
Bach1g03099 782 SMART c2hcfinal6 740 756 IPR001878 GO:0003676|GO:0008270
Bach1g03099 782 ProSiteProfiles Zinc finger CCHC-type profile. 741 756 IPR001878 GO:0003676|GO:0008270
Bach1g03099 782 SUPERFAMILY Retrovirus zinc finger-like domains 729 762 IPR036875 GO:0003676|GO:0008270
Bach1g03099 782 FunFam ATP-dependent RNA helicase RhlE 110 329 - -
Bach1g03099 782 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 119 147 IPR014014 GO:0003724
Bach1g03099 782 Pfam Helicase conserved C-terminal domain 355 460 IPR001650 -
Bach1g03099 782 MobiDBLite consensus disorder prediction 638 736 - -
Bach1g03099 782 Pfam Zinc knuckle 740 756 IPR001878 GO:0003676|GO:0008270
Bach1g03099 782 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 481 IPR027417 -
Bach1g03099 782 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 104 708 - -
Bach1g03099 782 SMART ultradead3 138 343 IPR014001 -
Bach1g03099 782 Gene3D - 711 766 - -
Bach1g03099 782 SMART helicmild6 380 460 IPR001650 -
Bach1g03099 782 CDD SF2_C_DEAD 340 469 - -
Bach1g03099 782 CDD GUCT_Hera 554 627 - -
Bach1g03099 782 FunFam Nucleolar RNA helicase II 348 538 - -
Bach1g03099 782 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 150 326 IPR014001 -
Bach1g03099 782 MobiDBLite consensus disorder prediction 657 702 - -
Bach1g03099 782 Pfam GUCT (NUC152) domain 547 649 IPR012562 GO:0003723|GO:0004386|GO:0005524
Bach1g03099 782 Gene3D - 120 330 IPR027417 -
Bach1g03099 782 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 355 500 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03099 Bach-Chr1 40613680 40618762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03099 124 482 Eukaryotic Initiation Factors Gene Family AT1G72730 37.088 3.38e-66 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03099 - - pcin:129296705 1154.81