Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03082 ATGGGGAGGCACTCTTGCTGTTACAAGCAAAAGCTTCGAAAGGGCTTGTGGTCGCCTGAGGAGGATGAGAAACTTCTCAGGCATATCACCAAGTATGGCCATGGATGTTGGAGCTCTGTTCCTAAGCAAGCTGGTAGTTTGCAGAGGTGCGGTAAGAGCTGCAGGCTTAGGTGGATCAATTACTTGAGGCCTGATTTGAAGAGAGGTACATTCTCACAAGAAGAGGAAAACCTTATCATTGAACTTCATGCAGTATTAGGGAATAGGTGGTCCCAAATTGCAGCACAATTGCCGGGAAGAACTGACAATGAAATAAAGAATTTGTGGAATTCTAGCTTAAAGAAGAAACTCAGGCAAAGAGGTATCGATCCTGTCACACATAAACCACTCTCTGAGGTTGAAAATGGAGAAGATAAGGAAGCAGCAGCCAGAAACCGAGAGAAAGTCGCAACAGTATCTAATGAATTGAACCTGCTCAAGTCAGAAAGTTTCATGTCAGATGCAGCTTCATATGAGCAGAGACCGTCTTCTATTGCCGCAAAAGCCTACACACCAGAGATGGAAGGTTCTTCCAGCTCCAAGACTGTTAACTTAAGAAGCAACAGCAATTTGATGAATAATTGCTCCAGTAAAGATTTCTTCCTAGACAGATTTTTGACAAGCCATCAGGAAGGCTATACGACCAGTTGCCAGCCTTCAGGTTTGATGGGGAATTTCCCCCTTCAGATGAGTTATGCATCCACTGACAGTCTCTCAACTAATTCATACTCTTCTCATTGGTTCAGCCAACCAGCAAGATCGTTTGATATGAACTCTGAATTAACTTCCAGTGCCATGTCTAATATTCTTTCACCGACAACCAGCTCATATCTCCCTGCTTCTATTTGCTACAAGCCTTCGCTTACTTTCCCCTCCGATGATATTTCTACGGCTTCTTTCACAGTGAACGGATCCCATGACTGGGAAACCAGTGCTTCCAACAATAGAAATAGCAGCAATAGAAACAGTAGCAACGCAGAATTCAGGAGTAACTGTCCCTTAAACGTACACAACAATATCCTTGCTTGGGGATTAGCAGATTGTAACAATTCTGGCAAAGAGGCCCAAATTCAACTGACGGAAAGCCAGACAGAAGAAGCCAAATGGTCTGAGTACCTTCACAATCCAATCTTAATGTTGGCTGCTGTACAAAGTCAAACTCCTGAATCTTTATGCAATGAGATAAAGCCGTCCACGCATTTGTTATCTGATACTCTAGGGGCTATTTTGCCTCATAACAAGCAGCAAGATCTTTCACAACCATCTTCTATCTTTTCCAAGGACATTCAGAAACTCACTGCAGCATTCGGACATATCTAG 1359 0.4327 MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGSLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSSLKKKLRQRGIDPVTHKPLSEVENGEDKEAAARNREKVATVSNELNLLKSESFMSDAASYEQRPSSIAAKAYTPEMEGSSSSKTVNLRSNSNLMNNCSSKDFFLDRFLTSHQEGYTTSCQPSGLMGNFPLQMSYASTDSLSTNSYSSHWFSQPARSFDMNSELTSSAMSNILSPTTSSYLPASICYKPSLTFPSDDISTASFTVNGSHDWETSASNNRNSSNRNSSNAEFRSNCPLNVHNNILAWGLADCNNSGKEAQIQLTESQTEEAKWSEYLHNPILMLAAVQSQTPESLCNEIKPSTHLLSDTLGAILPHNKQQDLSQPSSIFSKDIQKLTAAFGHI 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03082 452 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bach1g03082 452 MobiDBLite consensus disorder prediction 319 340 - -
Bach1g03082 452 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Bach1g03082 452 FunFam Myb transcription factor 11 68 - -
Bach1g03082 452 MobiDBLite consensus disorder prediction 128 146 - -
Bach1g03082 452 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Bach1g03082 452 MobiDBLite consensus disorder prediction 128 147 - -
Bach1g03082 452 Gene3D - 70 148 - -
Bach1g03082 452 Gene3D - 11 68 - -
Bach1g03082 452 PANTHER MYB DOMAIN PROTEIN 55 1 360 - -
Bach1g03082 452 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bach1g03082 452 FunFam MYB transcription factor 69 141 - -
Bach1g03082 452 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Bach1g03082 452 CDD SANT 70 113 IPR001005 -
Bach1g03082 452 SMART sant 13 64 IPR001005 -
Bach1g03082 452 SMART sant 67 115 IPR001005 -
Bach1g03082 452 Pfam Myb-like DNA-binding domain 68 111 IPR001005 -
Bach1g03082 452 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Bach1g03082 452 CDD SANT 17 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03082 Bach-Chr1 40491588 40493141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03082 1 451 MYB Transcription Factor Family AT1G09540 41.775 1.09e-97 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach1g03082 Myb_DNA-binding 3.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03082 K09422 - qsa:O6P43_007336 610.142