Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03079 ATGCCTGACTCAACCCGGCCAGGGGTGACAAGCAGCTCTTTCCATCAAAACTCCTTGTATGGGCCGTATGGCGAAGATTTTGTGGAGCTGGTATGGCAAAATGGTCAAATTCTTGTGCAAGGAGGAGGTCAATCAAGTAAAAGACAAAAGGGTTCCTCGTGCGTTGGGTACTCAGTAAGCCCTTCTAATAGTGAAGCTTATGATGAAGACATCTGCATTACGAAACGAGCAAGATTAAGCAATTTCTACTCGCTCTTGGATTTCCCTTCAAGTCCCAAGGACTCTGACATGGATTCTATACATAAAAACTCCCAACAAAGCAATGACCAATATTGCTATCAATTTGAATTGCCATACACCAAAAGCAAGAACTCCTTAAATCATCTTGAAGATACCCATTTGATGGTGGAAGATAAAAATGCAGACTTAAAACCAGGAAAAGAATCTAAGTTCTCCGAGGGAACTCATCAGCTAGTTTATTGTGGGAATAGTGAATTATGCTCATCTTTCTCACAACAATGCCCAGGTTCAGCTTCGTTCATGACACCAAGAATATCATTTCCCAGCTCACAGAAACATGACTTAAGAACTGTTGAAAAGCTTAATTTCACCAACATCGTCACACCTGCAGAGTTTATAACATCTACTTACCAGGGCAACAGTGCAACCAGACAGATAAGTAGTGCAGTTAAGGAAATTAAAGCAGGTAAAGATTATCAGAAATCAGTTGCAGCTACCCCCAGTAAAGCTCCTGATCATTCCGTAGTGAATGGCTCATCAACTAAAGGTTCACACAGTCTCACAGGATCATTTCAGGGGCAACCAGCTACTAATGCAAATCAAGTACCCTTGGTTGCAAAATGTTCTCAGGAATCGCTTCCTGATGAGCGCTCTAAAGCTATGGGTCATAACAGTGCTCCCAGGATTCAAGGATCCCACTGTCAACATAATAATCAAGCCTCCAGCTTGGCAGCAAATAGAGCAAAGGGAAAACCTGATACTTACCTTTGCAGTGAACAGTTGGTTCCATCTTCTTCTGTATGCTCACTTGGGGCCTCAAATGACCCAACATATTTGAGCAGAAAACATGAGCTTGAAGACACCTACGACTCAGCGTATTCAAATGAGTTGCAGGATGATGAAGAACAAGAAGGTTTAACAGAAGAAGAACCTCCTCGGGAGCGTACGAGAGGCAAGAGAAGCAGGAATGCAGAGATTCATAATTTTTCTGAAAAGAATCGAAGAGATAAGATCAACAAGAAGATGCGTGCATTAAAAGAGCTTATACCCAATTGCAATAAGATGGACAAAGCTTCAATGCTTGACCATGCCATTGAATATCTTAAGACACTGAAGCTTCAATTACAGATTATGTCACTAAGGGCGGGAATGTGTATGCCATTCATGATGTTACCTGCTGGTGCTAATCATCTAAACCCACTGCATTTAACTCAGTTCCCTCAATTGGGAGCCGGAATGGATTTGAGACCAAGCACAGGCACAGCTTGCAATTTACCTCAGTTCCCTCCTCCACAACTAGGACCTGCTTCTTTGCCTGGAATCACAGATAACAGACTTCAGATGTTTGGTTTCCCCAATCAAATGCTACCCATGTCAATTCCTCAAGCACCTTTCATTCCTATGCTTGGAAAGCCTTCTACAGTTCTCCCAACCAGCTCTACACCATCCAACCTCGTGCAGCATCTTGCTTCTGCCACCTTACACAATTCGCAGGACTCCTCAGTCCCCAACAACGTGGCCGCTTGA 1767 0.4318 MPDSTRPGVTSSSFHQNSLYGPYGEDFVELVWQNGQILVQGGGQSSKRQKGSSCVGYSVSPSNSEAYDEDICITKRARLSNFYSLLDFPSSPKDSDMDSIHKNSQQSNDQYCYQFELPYTKSKNSLNHLEDTHLMVEDKNADLKPGKESKFSEGTHQLVYCGNSELCSSFSQQCPGSASFMTPRISFPSSQKHDLRTVEKLNFTNIVTPAEFITSTYQGNSATRQISSAVKEIKAGKDYQKSVAATPSKAPDHSVVNGSSTKGSHSLTGSFQGQPATNANQVPLVAKCSQESLPDERSKAMGHNSAPRIQGSHCQHNNQASSLAANRAKGKPDTYLCSEQLVPSSSVCSLGASNDPTYLSRKHELEDTYDSAYSNELQDDEEQEGLTEEEPPRERTRGKRSRNAEIHNFSEKNRRDKINKKMRALKELIPNCNKMDKASMLDHAIEYLKTLKLQLQIMSLRAGMCMPFMMLPAGANHLNPLHLTQFPQLGAGMDLRPSTGTACNLPQFPPPQLGPASLPGITDNRLQMFGFPNQMLPMSIPQAPFIPMLGKPSTVLPTSSTPSNLVQHLASATLHNSQDSSVPNNVAA 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03079 588 MobiDBLite consensus disorder prediction 375 416 - -
Bach1g03079 588 MobiDBLite consensus disorder prediction 308 325 - -
Bach1g03079 588 MobiDBLite consensus disorder prediction 242 327 - -
Bach1g03079 588 MobiDBLite consensus disorder prediction 252 287 - -
Bach1g03079 588 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 402 451 IPR011598 GO:0046983
Bach1g03079 588 Gene3D - 398 459 IPR036638 GO:0046983
Bach1g03079 588 CDD bHLH_AtPIF_like 402 464 IPR047265 -
Bach1g03079 588 MobiDBLite consensus disorder prediction 388 416 - -
Bach1g03079 588 Pfam Helix-loop-helix DNA-binding domain 407 451 IPR011598 GO:0046983
Bach1g03079 588 FunFam Basic helix-loop-helix transcription factor 397 460 - -
Bach1g03079 588 PANTHER TRANSCRIPTION FACTOR PIF3 5 580 IPR044273 GO:0003700|GO:0006355
Bach1g03079 588 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 399 462 IPR036638 GO:0046983
Bach1g03079 588 SMART finulus 408 457 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03079 Bach-Chr1 40464303 40466553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03079 338 477 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 50.000 2.71e-32 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach1g03079 HLH 6.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03079 K12126 - pcin:129304463 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00298 8 1979825 1982162 Bach1g03079 1 40464303 40466553 BWGD
Bach1g03079 1 40464303 40466553 Bach1g03079 1 40464303 40466553 ECH