Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03062 ATGAGCAGCAAGGTAATTGTATCCGCAGTTTCTCTTATTCTCGTGGTGGGAGTCGCTTTGGGTGTCGTTGCCGTCGTCCACCACTCCAACAATGGTGAAGGGAAAACGGCAACCCACGTAAAGGCAGTGGCTGCCGTTTGTCAAGGCGCAACAGACCCCAAGTATTGCGAAAATACCCTCGGCAACGTCAAATCCGATGATCCAAAGGAATATGTCAAAACCGTTGTACAATCAACCTTGGACAATGTCATTAAGGCCTTCAACATGAGCGATAGGTTGTCCGTGGAGCATGGTAAGAGCGACAACGGCATCAAGATGGCCCTGGACGACTGCAAGGACTTGTTAGAGGCCGCCATGCATGATCTGGATGCTTCCGTGAATATGGTTCATGAGAACAACATTAACAGCGTCAATGAAAATTCTGCTGAGCTCAAGAATTGGTTGGGTGCTGTTATTGCTTACCAGCAATCATGCATGGAGGGCTTCAACACAGACGGTGAGAAGAAGGTGCAGGAGCAGTTGAACACTAACGGTGAGTTGGATGACGTTGGCAAGATCACTGGCTTGGCTCTCGACGTGGTTGCTGGCATCTCCCAAGTGCTTTCTTCCCTCAACTTGAACTTGAACTTGAAACCTGCCTCACGTCGTCTTCTTGAGATTGACAGTGAAGGGATGCCCACTTGGTTCTCTGCCTCGGATCGCAAGCTCTTGGCTGAGGCCAATCCAGGATCCTCGGAAGCAGCCAACGCTGTTGTGGCCCAGGACGGCAGTGGTCAATTTAAGACCATCCAAGCAGCTCTTGATGCTTACCCCAAGAACCTCCCAGGCAGATATGTTATCTACGTCAAGGCTGGTGTGTATGACGAGTACATCACCGTTAACAAAAACCAGAAGAATATCCTCATGTACGGTGATGGCATGACAAAGACCATCATCACCGGGAAGAAGAGCTTCAGCTCTGGCTGGAAGACCATGAGAAGCTCCACTTTCTGTGCCAACACTGCCCAGAGAGCCAAGTGGGGCAAGGGTCTCCTTACCAAGGATGATGCTATTCGTTACACTGCTGACCAATGGCTCCAAGCTGGCACTTGGTTGCCTGCCACTGGCATTCCTTTTACCGGTGGCTTCGCCAAGGCTTAA 1140 0.5053 MSSKVIVSAVSLILVVGVALGVVAVVHHSNNGEGKTATHVKAVAAVCQGATDPKYCENTLGNVKSDDPKEYVKTVVQSTLDNVIKAFNMSDRLSVEHGKSDNGIKMALDDCKDLLEAAMHDLDASVNMVHENNINSVNENSAELKNWLGAVIAYQQSCMEGFNTDGEKKVQEQLNTNGELDDVGKITGLALDVVAGISQVLSSLNLNLNLKPASRRLLEIDSEGMPTWFSASDRKLLAEANPGSSEAANAVVAQDGSGQFKTIQAALDAYPKNLPGRYVIYVKAGVYDEYITVNKNQKNILMYGDGMTKTIITGKKSFSSGWKTMRSSTFCANTAQRAKWGKGLLTKDDAIRYTADQWLQAGTWLPATGIPFTGGFAKA 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03062 379 Gene3D - 244 334 IPR012334 -
Bach1g03062 379 FunFam Pectinesterase 39 198 - -
Bach1g03062 379 PANTHER PECTINESTERASE 18 355 - -
Bach1g03062 379 SUPERFAMILY Pectin lyase-like 246 333 IPR011050 -
Bach1g03062 379 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 167 IPR035513 -
Bach1g03062 379 Pfam Plant invertase/pectin methylesterase inhibitor 42 191 IPR006501 GO:0004857
Bach1g03062 379 NCBIfam pectinesterase inhibitor domain 15 178 IPR006501 GO:0004857
Bach1g03062 379 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 197 IPR035513 -
Bach1g03062 379 CDD PMEI-like_3 45 198 - -
Bach1g03062 379 SMART PMEI_2 38 193 IPR006501 GO:0004857
Bach1g03062 379 Pfam Pectinesterase 249 335 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03062 Bach-Chr1 40358742 40360523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03062 4 340 Carbohydrate Esterase AT3G62170 36.828 4.29e-57 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03062 K01051 - gmx:100808559 381.719