Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03061 ATGAGTGGAAAAGTTATAGTTTCCGCCGTCTCACTCATCCTTGTGGTGGGTGTGGCTATGGGCGTTGTAGCCGTTGTTCACTTCAGTAACAATAATGATCCTACCATGGCAGCTAATGTTAAAGCTGTCCAAAGCATTTGCGGGAACGCAGAGGACCAGAAACTCTGCCATGAAACTCTTATCCCCGCCAAGGGCTCTCCCTCTGACCCAAAAGAATACTACAAGGCTGCTGTAGAAGCAACAACCAACAGCGTGATCAAGGCCTTGAATATGTCTGATAAGCTCTCCGTTGAGCATGGCGATAAAGACGGAGGTATCAAGATGGCCCTTGATGACTGCAAGGATTTGTTGCAATTTGCCTTGGAAAGCCTTCAGGCATCGGCTGACTTGGTCCGTAACAATGACATGCAAACTGTTCATGATCGCACCGATGACTTCAGGAATTGGTTGAGTTCTACCATCGCATACCAGCAAACTTGCATGGACAGTTTTGAAACAGACGGTGAGAAGAAGGTGCAGGAACAACTACAATCCAATGGTTTGGACGATATGGGAAAACTCACTGGCATGACACTTGACATTGTCTCTAGCTTGTCCAAGGTTCTTGAGTCATTCAACTTGCACTTGAACCAAAAGCCTGCTTCCCGTCGTCTTCTTAATGTTGAAGTGGATAGCCAAGGGTTCCCCACATGGTTCTCCGCTGCTGATCGCAAGCTCTTGGCTAAGTTGCATAGAGGAGGCGGACGTAGGGGATCAATAGGAATCAGGCCCAATGCAGTTGTTGCCCAAGATGGCAGTGGCACTCATAAAAGCATTGCTGATGCTATTGCTGCTGTTCCTAAGAACTCAAATATAAGATTTGTTATCTACGTTAAGGCTGGAATCTACAACGAGTACGTTACCGTTCCCAAAGATGCCAAGAATGTGCTTATGTACGGTGATGGCTCTACAAGGACCATTGTCACTGGCCGCAAGAACTTCGCACAGGGCACAAAGACAATGCAAACCGCTACCTTCGCTGCCGTTGGAGAGAGATTCATTGCCAAGTCAATGGGATTCGAGAACACTGCAGGTGCACAAGGGCACCAAGCCGTGGCACTTCGTGTGCAGAGTGACATGTCTGCTTTCTTCGATTGTGCAATTCATGGTTACCAAGACACATTGTACGCTCACGCCAATCGTCAGTTCTACCGCAACTGTGAAATCTCTGGCACCATCGACTTCATCTTCGGCATGTCAACGACATTGATCCAGAACTCTAGGATCATTGTGAGGAAGCCAGGCCCAAGTCAATTTAACACAGTGACTGCAGATGGAACAACCGAGAAGAACCAGATTACTGGTATTGTGATCCAAAATTGTGAGATCATCCCAGAGAGGGAACTTTTCCCAGAAAGATTCATAGTGAAATCGTACTTGGGAAGGCCATGGAAGGCATACTCAAAGACAGTGATTATGGAATCCACCATTGGGGACTTCATTCAACCAGATGGATGGACTCCTTGGAGTGGAAACCAGTACCTTGACACATTGTACTATGCTGAGTATAACAACAGAGGACCTGGTGCTGCCCTAGATAGAAGGGTTAGATGGAAGGGTTACCGTGGAGCAATTAGCAAGGATGAAGCTGCCCAGTTCACTGCTGGTATATTCCTCAAGGGTGGCCCCGCCGGTAGATCTGAGGATTGGTTGAGGTCTTCCGGAATTCCCTTCGAGATTGGCTTCACCGCACCTAGAAATTAA 1743 0.475 MSGKVIVSAVSLILVVGVAMGVVAVVHFSNNNDPTMAANVKAVQSICGNAEDQKLCHETLIPAKGSPSDPKEYYKAAVEATTNSVIKALNMSDKLSVEHGDKDGGIKMALDDCKDLLQFALESLQASADLVRNNDMQTVHDRTDDFRNWLSSTIAYQQTCMDSFETDGEKKVQEQLQSNGLDDMGKLTGMTLDIVSSLSKVLESFNLHLNQKPASRRLLNVEVDSQGFPTWFSAADRKLLAKLHRGGGRRGSIGIRPNAVVAQDGSGTHKSIADAIAAVPKNSNIRFVIYVKAGIYNEYVTVPKDAKNVLMYGDGSTRTIVTGRKNFAQGTKTMQTATFAAVGERFIAKSMGFENTAGAQGHQAVALRVQSDMSAFFDCAIHGYQDTLYAHANRQFYRNCEISGTIDFIFGMSTTLIQNSRIIVRKPGPSQFNTVTADGTTEKNQITGIVIQNCEIIPERELFPERFIVKSYLGRPWKAYSKTVIMESTIGDFIQPDGWTPWSGNQYLDTLYYAEYNNRGPGAALDRRVRWKGYRGAISKDEAAQFTAGIFLKGGPAGRSEDWLRSSGIPFEIGFTAPRN 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03061 580 ProSitePatterns Pectinesterase signature 2. 402 411 IPR033131 -
Bach1g03061 580 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 200 IPR035513 -
Bach1g03061 580 Gene3D - 253 575 IPR012334 -
Bach1g03061 580 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 199 IPR035513 -
Bach1g03061 580 Pfam Pectinesterase 258 554 IPR000070 GO:0030599|GO:0042545
Bach1g03061 580 SMART PMEI_2 38 194 IPR006501 GO:0004857
Bach1g03061 580 CDD PMEI-like_3 45 200 - -
Bach1g03061 580 PANTHER PECTINESTERASE 18 565 - -
Bach1g03061 580 FunFam Pectinesterase 252 575 - -
Bach1g03061 580 NCBIfam pectinesterase inhibitor domain 21 196 IPR006501 GO:0004857
Bach1g03061 580 FunFam Pectinesterase 39 199 - -
Bach1g03061 580 Pfam Plant invertase/pectin methylesterase inhibitor 42 194 IPR006501 GO:0004857
Bach1g03061 580 SUPERFAMILY Pectin lyase-like 255 569 IPR011050 -
Bach1g03061 580 ProSitePatterns Pectinesterase signature 1. 283 302 IPR018040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03061 Bach-Chr1 40353880 40355899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03061 1 575 Carbohydrate Esterase AT2G47030 40.328 2.24e-145 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03061 K01051 - gmx:100775246 756.133