Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03037 ATGGAGTATTCGGGTATTAGTGATATGATGACAAGTTTATCAGACTGTGGGTCATCAGCAACAACAGCAATATATGGAAATGAAGAAGAGATGATCATAAAGAAAGGTCCTTGGACAGAGGAAGAGGATTCTCTTCTCTTCAACTACATCACCCTCCATGGCGAAGGTCACTGGAACTCCGTCGCTCGCTTTGCCGGCTTGAAGAGAACGGGCAAAAGCTGCAGATTAAGATGGTTAAACTACTTGCGTCCCAATGTTCGACGTGGTAATATCACCCTTCAAGAACAGCTCTTGATTCTTGACCTCCATTGCCGCTGGGGTAACCGGTGGTCAAAAATAGCGGAGCACTTGCCAGGGAGAACTGACAATGAGATCAAGAACTACTGGAGAACCAGAGTAGTAAAGCAGGCTAAGCAACTCAAATGTGATGTCAATAGCAAACAGTTCAGAGATGCCTTGCGCTTCGTATGGATTCCCCGTTTGATCGAGCGGATCCAGGCATCTTCCCGGTCGGATTCTAACACCAACCCCAATTTCATGTCACCGCATGTTCAAGGTCCTTCCGTCTCAGACTCTGCCATATCTTACTCTTACGACTTAGTGCATGGTGGTGGTGGTAGTAGCTACTCCAGTAGTGCCCAAAACGGGTTCGGTTCTGGACACGGGTCCAGTTCAGGTTCATATCAGCATGTGGATTCGGATATCCAAACATTGGAATCAGTAGGGAATGCTTTTGGTGAAGCTGACTTATGGACTGATGAAAACATTTGGTTCCTGCAGCAACAGCTGGATGATCACTCTTGA 804 0.4677 MEYSGISDMMTSLSDCGSSATTAIYGNEEEMIIKKGPWTEEEDSLLFNYITLHGEGHWNSVARFAGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQLLILDLHCRWGNRWSKIAEHLPGRTDNEIKNYWRTRVVKQAKQLKCDVNSKQFRDALRFVWIPRLIERIQASSRSDSNTNPNFMSPHVQGPSVSDSAISYSYDLVHGGGGSSYSSSAQNGFGSGHGSSSGSYQHVDSDIQTLESVGNAFGEADLWTDENIWFLQQQLDDHS 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03037 267 Pfam Myb-like DNA-binding domain 35 82 IPR001005 -
Bach1g03037 267 Pfam Myb-like DNA-binding domain 88 131 IPR001005 -
Bach1g03037 267 Gene3D - 92 133 - -
Bach1g03037 267 CDD SANT 92 131 IPR001005 -
Bach1g03037 267 ProSiteProfiles Myb-like domain profile. 30 82 IPR001005 -
Bach1g03037 267 MobiDBLite consensus disorder prediction 209 230 - -
Bach1g03037 267 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 32 199 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bach1g03037 267 SUPERFAMILY Homeodomain-like 33 129 IPR009057 -
Bach1g03037 267 SMART sant 34 84 IPR001005 -
Bach1g03037 267 SMART sant 87 135 IPR001005 -
Bach1g03037 267 FunFam Myb transcription factor 35 87 - -
Bach1g03037 267 ProSiteProfiles Myb-like domain profile. 83 133 IPR001005 -
Bach1g03037 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 86 IPR017930 -
Bach1g03037 267 Gene3D - 34 87 - -
Bach1g03037 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 137 IPR017930 -
Bach1g03037 267 CDD SANT 37 82 IPR001005 -
Bach1g03037 267 FunFam MYB transcription factor 92 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03037 Bach-Chr1 40190912 40191925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03037 28 263 MYB Transcription Factor Family AT2G47190 47.015 1.51e-79 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach1g03037 Myb_DNA-binding 6.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03037 K09422 - gmx:547458 316.62