Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03026 ATGGTTAAACCCTTTTTCAGTAGCGTAATTTGTATTTCACAGTCTACGAAGCTGGAGAATCACAAAGACCACCCGGACCCAAGAATCAATTTCACTCGAGACGTACTCCCTCAGCATCATGACAGTCACCATCGTCCCCATGAACAGCAATTCAACCAGTGCAAGCCTTACCAGGATAACCACCAATTTGGTAACTTCACTCAGCCCCAAGACAATGGCTTCCTTAACCACGATCCTCATTTTAACCAGCACCACCACATGAACGGCGACTCAAACAACTCGTTTGGTAATGGAGGACACCATTTTACTAACGGTGACAGTGGATATAGTTCTAACCATTCTATGGCCCATAATGGGCGGAAACGAGGCTGGCATCATAACTCTAGTCACGGAACTTCTCCAGATCAAGTTGATGGTGGATATCACTGGAAACTTTATGTTTCACCTGTTCCAAGAACATCGACAGAAGCTGAAATCCGATCTGTGTTTGGAGGACATGGAACTATTGTCGAGGTTGTTCTTTTAAGGGATAAGAGAACTGGCTTCCGACAAGGAAGTTGTTTTGTGAAATTTGGAACATTAGAAGCAGCTGAAAGTGCCATAAGAGCTTTAAATAATCAGTATACATTTCCTGGGGAATCATTTCCCGTTGTTGTCAAATATGCTGAACGAGACCTTGGACGTCGCGATGTGCTTGACAAAGTGTTTGTGGGTCACCTCATCAAAGATGCTTCAAAAAATGAAATTGAAGAAATATTTTCCCCTTATGGTCATGTTGAAGATATCTTCATCGCTTATGATGAGCAGAGACAAAGCCGTGGCTATGGCTTTGTCAAATTTTCAAATAGAGAAATGGCATGGGCAGCTATCCAAGGGTTAAATGGAACATTCACCATGAGAGGGTCTAATTGTCCACTAATTGTTCGTTTTGCGGATCCTAAGAAACCTAAGACGGGAGATCCAAGGGGCAATAATTTACAAGGGAATGTGAATCTCGGTCCCTGTTCTCAAGAACCAACAGTTAGGCCTTTACAAAATTTTGGTAATTGCATTGGAGGGAGTGTTCTGCCTATGGCTCCACATTATTCTACAATTCCACACCCACAGGTTGCTTCTTATGTGCAAAACTGGGAACCTGCTGCTGCCATGGTGCAACAACCATTTCCTCCCCAACCAGCACACCCACAATTGCCTTCAATGTCATTGCAGCCAACTCCAGCTCCCAGCTTATCTTCTCAACCAGTTGTTGCTGAAGTGCATAGACAGTCACATCCGACAGATTCATCAACTCAACATATAAAGCAGCAGTTAAATTCACAGACCAGAAGTGACCCTCTAACATTATCCAGCAGTATGTCACCTGATATGCCTGTAAGTCCCCAAGAAGAAGCTCCTGATTGTGACTGGAGTGAACATACCTGTCCTGATGGTTACAAGTACTACTACAACTGTGTTACTTGTGAAAGCAGATTGGCCTGCAGTGGGAGAAGCCTGATGAGTATGCCTTGTATGATCAAGAAATACAAAAGCAGCAAGAGCAGGAAGATTTCCATTGATTGCACTCATAATTGTCATTTCCTTCCGACAAGTTGCTCAAAGATGACAGAGAGAGGTGTACAGAAGTGTCTGAAAGGGATATCTTCTACGTGA 1650 0.4345 MVKPFFSSVICISQSTKLENHKDHPDPRINFTRDVLPQHHDSHHRPHEQQFNQCKPYQDNHQFGNFTQPQDNGFLNHDPHFNQHHHMNGDSNNSFGNGGHHFTNGDSGYSSNHSMAHNGRKRGWHHNSSHGTSPDQVDGGYHWKLYVSPVPRTSTEAEIRSVFGGHGTIVEVVLLRDKRTGFRQGSCFVKFGTLEAAESAIRALNNQYTFPGESFPVVVKYAERDLGRRDVLDKVFVGHLIKDASKNEIEEIFSPYGHVEDIFIAYDEQRQSRGYGFVKFSNREMAWAAIQGLNGTFTMRGSNCPLIVRFADPKKPKTGDPRGNNLQGNVNLGPCSQEPTVRPLQNFGNCIGGSVLPMAPHYSTIPHPQVASYVQNWEPAAAMVQQPFPPQPAHPQLPSMSLQPTPAPSLSSQPVVAEVHRQSHPTDSSTQHIKQQLNSQTRSDPLTLSSSMSPDMPVSPQEEAPDCDWSEHTCPDGYKYYYNCVTCESRLACSGRSLMSMPCMIKKYKSSKSRKISIDCTHNCHFLPTSCSKMTERGVQKCLKGISST 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03026 549 SMART rrm1_1 144 220 IPR000504 GO:0003723
Bach1g03026 549 SMART rrm1_1 234 309 IPR000504 GO:0003723
Bach1g03026 549 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 233 313 IPR000504 GO:0003723
Bach1g03026 549 MobiDBLite consensus disorder prediction 385 402 - -
Bach1g03026 549 MobiDBLite consensus disorder prediction 385 466 - -
Bach1g03026 549 SUPERFAMILY RNA-binding domain, RBD 234 324 IPR035979 GO:0003676
Bach1g03026 549 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 143 224 IPR000504 GO:0003723
Bach1g03026 549 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 145 212 IPR000504 GO:0003723
Bach1g03026 549 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 235 298 IPR000504 GO:0003723
Bach1g03026 549 SUPERFAMILY RNA-binding domain, RBD 125 227 IPR035979 GO:0003676
Bach1g03026 549 Gene3D - 464 492 - -
Bach1g03026 549 PANTHER RNA BINDING PROTEIN 61 377 - -
Bach1g03026 549 Gene3D - 229 319 IPR012677 -
Bach1g03026 549 MobiDBLite consensus disorder prediction 403 457 - -
Bach1g03026 549 Gene3D - 141 228 IPR012677 -
Bach1g03026 549 SUPERFAMILY WW domain 468 490 IPR036020 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03026 Bach-Chr1 40119955 40126312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03026 145 343 Eukaryotic Initiation Factors Gene Family AT4G34110 27.907 8.00e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03026 K13207 - gmx:100776162 478.404