Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03025 ATGGAGAAGAAGGAGATGCTGGCCGTGAAGACGGAGGATGCAATTGGATCCTCTTCATTTCCTACTAGTTTTAATTCAAACAGCTATCCATTCTCAAGCGTGTTTGATTTTTGTGAAGCGGAAAAGAGCTCTTTAGGGTTTATGGAGTTACTGGGTATGCAGGAGTTTAGTCCTCTGCTTGATTTGCCTCAAGACTCTACCATGGCTTCCTCTGCTCTCAAAGATCCATCTGAAACTGTTAAAGAGTGTTCTGAGGTGTTGAATCAGCAGCCTGCTACTCCAAACTCTTCAACGATTTCATCTGAGTCCAGTGAGGCACTGAATAATGATCAGAATAAAGGGGAAGAAGAACAGCAAAGGACCAAGAAACAGTTGAAAGCTAAGAAGACAAATCAGAAGAGACAGAGAGAACCGAGATTCGCGTTCATGACGAAAAGCGAAGTCGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTTAAAAACAGCCCCTTTCCCAGGAGCTACTATCGTTGCACCAGTGTATCATGTAATGTGAAGAAACGAGTGGAGAGATCTCTTAATGATCCAAGGGTTGTAGTGACAACCTATGAAGGCCAACACACACATCCAAGCCCAGTTATGCCTCGTTCAACCCTCGCCGGCGCCGCTTCATTACCACCGGGTATCTCCGCCGGGAGCGCCACCAACTTTGGTTCATTACTGCCAGGAAACCTATCCCAGTATCAGCAACAGCACTACCAACAACAATTCCTTCTTAACACATTGTCGTCTTTGGGTTTCCCTTACATTAATGATTCGACTTCAAAGAATATTGCTTTTCCTCAAGAAAGACGGCTTTGTAATGCAGGGTCGGAAACGGCTTTCCTAAGCGACAATGGGCTTCTTCAAGACATTGTTCCCTCTCATATGTTGAAAGAAGAGTAG 942 0.448 MEKKEMLAVKTEDAIGSSSFPTSFNSNSYPFSSVFDFCEAEKSSLGFMELLGMQEFSPLLDLPQDSTMASSALKDPSETVKECSEVLNQQPATPNSSTISSESSEALNNDQNKGEEEQQRTKKQLKAKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKRVERSLNDPRVVVTTYEGQHTHPSPVMPRSTLAGAASLPPGISAGSATNFGSLLPGNLSQYQQQHYQQQFLLNTLSSLGFPYINDSTSKNIAFPQERRLCNAGSETAFLSDNGLLQDIVPSHMLKEE 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03025 313 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 88 245 IPR044810 GO:0003700
Bach1g03025 313 SUPERFAMILY WRKY DNA-binding domain 143 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach1g03025 313 Coils Coil 115 135 - -
Bach1g03025 313 MobiDBLite consensus disorder prediction 109 124 - -
Bach1g03025 313 PIRSF WRKY_txn_fact_IIc 1 313 IPR017396 GO:0003700
Bach1g03025 313 SMART WRKY_cls 151 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach1g03025 313 FunFam WRKY transcription factor 57 137 211 - -
Bach1g03025 313 Pfam WRKY DNA -binding domain 152 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach1g03025 313 MobiDBLite consensus disorder prediction 67 138 - -
Bach1g03025 313 MobiDBLite consensus disorder prediction 82 108 - -
Bach1g03025 313 Gene3D WRKY domain 136 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach1g03025 313 ProSiteProfiles WRKY domain profile. 146 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03025 Bach-Chr1 40116817 40118358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03025 29 313 WRKY Transcription Factor Family AT2G47260 47.147 2.17e-69 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bach1g03025 WRKY 1.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03025 - - aprc:113872234 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00341 8 2246025 2247866 Bach1g03025 1 40116817 40118358 BWGD
Bach1g03025 1 40116817 40118358 Bach1g03025 1 40116817 40118358 ECH