Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03019 ATGTCGAAGAGGAAGTTCGGATTCGAAGGTTTTGGCATAAACCGCCAGGCAACCTATAATTTTGACCGATCTCAAGCCCCTCAACGACTCTATGTCCCTCCTTCCTCACGTCACGGGCATGACAACTACGAGGATACCGACCTTGACAACATCGAGTACGACGATAATGATACTGCCAAGGACGGGAGCAATAATAATGGTGACAACGAGGAAGAGATTGACCCTCTTGATGCTTTCATGGAAGGGATTCATGAAGAAGTGAAGGCTGCACCGCCTCCTAAGCCGAAGGCAGAGGAGAGGTATAGGGACGATGATGAGGACGATCCGATGGAGAGCTTTTTGAGAGCGAAGAAGGACTTAGGATTGACCCTGGCGTCCGAGGCTCTTCAGGCTGGATATGATTCTGACGAGGAGGTTTATGCTGCTGCAAAGGCTGTGGACGCTGGTATGTTAGAGTATGATTCTGATGATAATCCTATCGTTGTCGATAGGAAGAAAATTGAGCCAATACCAGCTCTGGATCACAGTTCTATTGACTACGAGCCATTTAATAAGGATTTCTACGAGGAGAAATCTTCAATATCAGGCATGAGCGACCAAGATGTTGTTGAATATCGGAAGAGTTTAGCTATTCGTGTATCAGGTTTTGATGTTCCTAGGCCCGTTAAGACCTTTGAGGACTGTGGTTTTTCTCCACAACTTATGAATGCTATAAAAAAACAAGGTTATGAGAAGCCGACATCCATACAGTGCCAAGCTTTACCCGTTGTGCTTTCTGGTACAGACATTATTGGTATAGCAAAAACTGGTTCTGGTAAAACTGCTGCTTTTGTGCTTCCTATGATTGTACATATCATGGATCAGCCTGAGCTTGAGAAGGAAGAGGGTCCTATAGGAGTAATCTGTGCACCTACTAGAGAATTGGCACATCAGATATACTTGGAGTCCAAGAAATTCGCAAAAGTTTGTGGGATACGTGTCTCTGCTGTGTATGGTGGAATGTCAAAGCTAGATCAGTTCAAAGAACTCAAGGCAGGTTGTGAGATAGTCGTTGCTACTCCTGGCAGATTGATAGACATGCTGAAAATGAAGGCTCTTACAATGACGAGGGCAACATACTTGGTGCTTGATGAGGCTGATCGAATGTTTGACCTTGGATTTGAGCCACAAGTAAGGTCCATTGTTGGTCAAATTAGACCTGATCGCCAAACTTTACTTTTTTCTGCAACAATGCCACGTAAAATTGAAAAGTTGGCAAGGGAAATCCTTACTGATCCTGTGAGAGTAACAGTTGGGGAAGTTGGAATGGCCAATGAAGATATTACTCAAGTTGTTCAAGTAATTCCTTCTGATACGGAGAAATTGCCATGGCTTTTGGAGAAGTTGCCTGGAATGATTGATGAAGGTGATGTACTGGTATTTGCTTCCAAAAAGGCTACCGTGGATGAAATTGAATCACAATTGGCTCAGAGAGGCCTTAAAGTTGCCGCTCTTCATGGTGATAAGGATCAAGCATCTAGGATGGAAATTTTGCAAAAGTTTAAATCTGGTGTTTACCATGTACTGGTTGCAACTGATGTTGCTGCTCGTGGTCTGGACATTAAGTCAATTAAGTCAGTGGTAAACTTTGATATTGCAAAAGATATGGACATGCATGTTCATCGCATTGGTAGAACAGGTCGTGCTGGTGACAAAGATGGGGTTGCATACACTCTTATAACTCAGAAAGAAGCGCGGTTTGCTGGTGAATTGGTTAATAGTTTAATTGCAGCTGGGCAGAATGTGTCCACGGAGTTAATGGATCTTGCTATGAAGGATGGGAGATTCAGGTCAAAACGTGATGCAAGAAAAGGAGGTGGGAAGAAAGGTAAAGGGAGAGGAGGTGGTGCTGGGGGTCGAGGTGTTCGGGGAGTGGATTTTGGCTTGGGTATTGGATATAATCCAGAGTCCAACGCTTCATCTAACACGGCTCCAAGTCGGGCTCCAAGTCGATCTGCCGCTGTAAATTCAGTGCGAACAGGAATGATGGCACAATTTAGGAGTAACTTTGTCGCTGCTTCAAATTCTCAAAATCAAGACTTCAGTAACAGTACAAGCATGTCTGCTAATAAGAGACCAGCACTCCCTGGCTTTGTTTCCGGTGGATCAATAGGTGGGGATATAAATACTGCTCAATCTACCGCTGCATTTAGTCCTGCTACATCAGCAGTAAATGCCACTACTCAGATCTCTGGAGTTAACGCTAGTCCGAAGAACACGGAGAGTTCTAGACCTAGAGAAAGGCGGAGGCCATCTGGTTGGGATAGATAG 2310 0.4446 MSKRKFGFEGFGINRQATYNFDRSQAPQRLYVPPSSRHGHDNYEDTDLDNIEYDDNDTAKDGSNNNGDNEEEIDPLDAFMEGIHEEVKAAPPPKPKAEERYRDDDEDDPMESFLRAKKDLGLTLASEALQAGYDSDEEVYAAAKAVDAGMLEYDSDDNPIVVDRKKIEPIPALDHSSIDYEPFNKDFYEEKSSISGMSDQDVVEYRKSLAIRVSGFDVPRPVKTFEDCGFSPQLMNAIKKQGYEKPTSIQCQALPVVLSGTDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIYLESKKFAKVCGIRVSAVYGGMSKLDQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPRKIEKLAREILTDPVRVTVGEVGMANEDITQVVQVIPSDTEKLPWLLEKLPGMIDEGDVLVFASKKATVDEIESQLAQRGLKVAALHGDKDQASRMEILQKFKSGVYHVLVATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITQKEARFAGELVNSLIAAGQNVSTELMDLAMKDGRFRSKRDARKGGGKKGKGRGGGAGGRGVRGVDFGLGIGYNPESNASSNTAPSRAPSRSAAVNSVRTGMMAQFRSNFVAASNSQNQDFSNSTSMSANKRPALPGFVSGGSIGGDINTAQSTAAFSPATSAVNATTQISGVNASPKNTESSRPRERRRPSGWDR 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03019 769 Gene3D - 185 429 IPR027417 -
Bach1g03019 769 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 223 251 IPR014014 GO:0003724
Bach1g03019 769 MobiDBLite consensus disorder prediction 17 31 - -
Bach1g03019 769 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 254 429 IPR014001 -
Bach1g03019 769 FunFam probable ATP-dependent RNA helicase DDX17 185 432 - -
Bach1g03019 769 CDD SF2_C_DEAD 441 573 - -
Bach1g03019 769 SMART ultradead3 242 444 IPR014001 -
Bach1g03019 769 MobiDBLite consensus disorder prediction 606 634 - -
Bach1g03019 769 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 189 603 - -
Bach1g03019 769 Gene3D - 430 607 IPR027417 -
Bach1g03019 769 MobiDBLite consensus disorder prediction 649 668 - -
Bach1g03019 769 MobiDBLite consensus disorder prediction 739 769 - -
Bach1g03019 769 Pfam Helicase conserved C-terminal domain 467 563 IPR001650 -
Bach1g03019 769 MobiDBLite consensus disorder prediction 53 67 - -
Bach1g03019 769 MobiDBLite consensus disorder prediction 86 108 - -
Bach1g03019 769 Pfam DEAD/DEAH box helicase 247 418 IPR011545 GO:0003676|GO:0005524
Bach1g03019 769 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 375 383 IPR000629 -
Bach1g03019 769 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 432 IPR027417 -
Bach1g03019 769 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 603 IPR027417 -
Bach1g03019 769 MobiDBLite consensus disorder prediction 739 753 - -
Bach1g03019 769 MobiDBLite consensus disorder prediction 16 72 - -
Bach1g03019 769 SMART helicmild6 482 563 IPR001650 -
Bach1g03019 769 CDD DEADc_DDX42 234 430 - -
Bach1g03019 769 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 454 603 IPR001650 -
Bach1g03019 769 MobiDBLite consensus disorder prediction 754 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03019 Bach-Chr1 40070676 40074465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03019 223 579 Eukaryotic Initiation Factors Gene Family AT3G13920 34.722 2.44e-61 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03019 K12835 - gmx:100814854 1247.65