Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03002 ATGGGAGAGGTAGTTTTGTTTATCGACGATTTGCAATCAATTTCTGGGTTTTCTCGCTGTAGAATATGTCATGAAGAAGAATTTGAGAGCTCAAGAGGCTTGGAAGCTCCTTGTGCTTGCTCTGGCACCGTTAAGTTTGCTCATAGGGACTGCATACAGAGATGGTGCGACGAGAAAGGAAATACAACTTGTGAAATATGTCTCCAGCAATATGAACCTGGATATACGGCACCTCCAAAGAAACCTCAGAATCAAATAATTGATGAAGCAATGACCATTAGAGATAGCCTACAAATTCCTAGAAGGGAGCATGAGGCATTAAACGCAAGATTAGAGGGTATGGTTGAAGGAATACCCAGAGATGGGGACTATGCTGAATGCACATCTGCTGCTGACAGAAGCGCGTCTTGCTGTCGATCGCTAGCTTTGGCTTTTACACTTGTTTTGCTCACAAGAAATCTTTTCATGGTGCTCACAAGTGGAACGGAAGACTACCCATTTTCCCTTCTTACAGTATTTATACTTAGGGCTAGTGGAATTATTGTACCCATGTACGTAATTATTAGGACGATCGGAGCAATTCAAAACAGTGCTCGGCGCCGGAATCAGGATTCTGATGATGACGTGTCGATTTCTGATGGAGATGATGAAGAAAATGAGCCAACGCACGATCCAAATCATCCTTTCCTGGTCAGAGTGGATGTTATGATGGAAACTCAATCATGTGAAGTAGTGCCTCCAAAGCCCCAGGTTAAAGCTACCTTTCGCCTTGGCACAGAATTATACTCTGTTCAAGCAAAGGAAGGATCTTTCTCCCTCTCAGAGCAATTAGTTTCATTGAAAGAGGAAAGCATGACCATATTGAAGGATTTCATAACAAAGCATAATGTTCCTCATGAAGTCCCCGATGAATTAGTTGAACCTTCTTCCGAAGATGAAGATGAATTTCCTAACAAGCCGCAAGAGAAATCCAAGAAGTCAAAATTAAAATAG 993 0.4209 MGEVVLFIDDLQSISGFSRCRICHEEEFESSRGLEAPCACSGTVKFAHRDCIQRWCDEKGNTTCEICLQQYEPGYTAPPKKPQNQIIDEAMTIRDSLQIPRREHEALNARLEGMVEGIPRDGDYAECTSAADRSASCCRSLALAFTLVLLTRNLFMVLTSGTEDYPFSLLTVFILRASGIIVPMYVIIRTIGAIQNSARRRNQDSDDDVSISDGDDEENEPTHDPNHPFLVRVDVMMETQSCEVVPPKPQVKATFRLGTELYSVQAKEGSFSLSEQLVSLKEESMTILKDFITKHNVPHEVPDELVEPSSEDEDEFPNKPQEKSKKSKLK 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03002 330 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 11 77 IPR013083 -
Bach1g03002 330 ProSiteProfiles Zinc finger RING-CH-type profile. 12 74 IPR011016 GO:0008270
Bach1g03002 330 SMART ringv_2 19 68 IPR011016 GO:0008270
Bach1g03002 330 Pfam Protein of unknown function (DUF3675) 73 191 IPR022143 -
Bach1g03002 330 SUPERFAMILY RING/U-box 18 72 - -
Bach1g03002 330 FunFam E3 ubiquitin-protein ligase MARCH4 9 77 - -
Bach1g03002 330 MobiDBLite consensus disorder prediction 296 330 - -
Bach1g03002 330 CDD RING_CH-C4HC3_MARCH 20 67 - -
Bach1g03002 330 MobiDBLite consensus disorder prediction 198 227 - -
Bach1g03002 330 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 18 201 IPR033275 -
Bach1g03002 330 Pfam RING-variant domain 20 67 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03002 Bach-Chr1 39981939 39985558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03002 20 67 C3H Transcription Factor Family AT2G37950 42.857 3.12e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03002 - - gmx:100797029 323.168