Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02996 ATGGAAACCAGTTATCGATCTCAGGTGTTTCTCGGCGTTCATTTCGTACTATTTGGTTTTGATCCTATCAGCGAAAACAAGGTCCGATTCAAGCTTTTAAATGGCGGCGCTGTTGATGTCAGTCAATGCAGCCGAAGTTGCACTCATGTCATTGTAGATAAGCTTGTATATGATGATCCTGTTTGTGTTGCTGCCCGAAATGATGGCAAGATTCTTGTAACTGTCCTATGGGTTGATCATAGCGCTGATATTGGAATGCCAGTTGACCCTACCTTGATTATGTACAGACCTCTTAAGAATTTAAATGGAATACCGGGTGCCAAAAATGCGATCATGTGCCTGACAGGTTATCAACGTCAGGATCGGGATGACATTATGACAATGGTTCGCCTGATGGGCGCGGAGTTTTCTAAGCCATTGGTGGCGAACAAGGTTACTCATCTTATATGCTACAAATTTGAAGGGGAAAAGTATGAGCTTGCCAGGAAATTGAAGACAATAAAGCTAATTAATCATCGTTGGTTAGAAGATTGCTTGAAGCATTGGGTGCTGCTTCCTGAAGATAAATATAACAAGAGTGGTTATGAACTAGAGATGATGGAGGCAGAGGCTAAAGATTCTGAAGAAGGTGGAGATTCCATGCAGGTGCATTCTGGGAAAAGAAGTATAAACAAAAGCCCCCTTGGGTCAAAAATTGGTCTAGCCACAACTCACGAAATAGCAAAATCCGCCAGAGTGGCATCGAATGCATTCCCAGACTCTACTGCTTCTAAGGATTTGCAGGAAGTGAATGAGGTTAAATCGACTCCCAGAAGTGAGAATAGAGCTGATCAAGCCTCAAGCTTTGATGATGTTAATGATCTAAAGAAACGTTGTCAGGATCGTGAGGCTTCTAGACATGCTACATCATGTCAACTACCTGACTCAAAGATCAAGGCTTCCGAGCCTCGGAATACCAATGTACGAATGCCATTTAACTTCCAGGATCTTGGTATTCTTGAAAATGGTAATTCATCTGGTCAGCTATCTGGTGTGCATGTTGGCACTTCTGAATCTGGGAAGTTGGTAAATGACTTGATGTTAACTTCTGAAAGTGCTGAACGATTGGTACATTCAGATGCCAAGGTCAGTCCTACGAGTTACTCCAGGAAAAACGCAAGGAAATTTTCACTTCCAAGGACATCAGATGAAAGTTCAGGCAATGTAACTTGCCCTTCTGTGTCACCTTTAAATGATTTGAAATTTGGCAACGATCGTGAAACTTCATCCAGAAAGGTAGAAAACCCAAGGGATAGAATCACCTCTCCTTGTGCTGAAGGTTCTAGTAAAGAAAATAATTTTATTCATGGGGGAGAATCCGTTAGCTTACTGCCTCAGAAAAGGACCACATCTTCTGCTAAATTAAAATCAAGGAAGATTAGTCCTGATGTTAAATCGTCCGGTGGAAGAATCTCATCAACAAATGGTGTAACTCAAGGATTGAAGTTGATATCTTTCACCAAGGAACCACCCGAGACTGAAGGCGATGTTTCCGCTGATAAAGATGGTGTTAACAAGCCAAACACTTTCTCCAAAATTGCGAGCTCAGAGTCTGCTGAGTGTGATAATGCCCATCAGGATTTAGCTCAAACGTCTGTTAAAAAGGGTTTGAGTGATTCTAAGATTGATGACAAGCTTGATAAGGCAGGTTTTGTCTTGGGAGAATCGGTTCATGATGGTAATGAGATACAGCCACAGAATGAGAAGAAAGATCTTCAGTGTTCATCTCCAAGTAACAAGAAAATTCGAAACGACGAATCCAGTGGTCTTACTAGTATGGATTTATGCAATAAAGCAAGCACTACCTTGGGTAAAAAATCACCCCGGAAAAAGACACTTACCAAAAAGAGTTTGGGTTCTAGACCTAAATTAAGGGCTGCCACTAAACAGAAGGGCTCTGTTTGCTTGAATAAAACAAGTCCTCAAGGTGATGGTGTAAGTTTTTCCAGTGGATGCCTAGAGACTGCAACTTGTACTGCTGAGAAGCCTCCAATGTCCTTGCGTATTGTCGATGTTGAAACATCATTGGAGCGAGAAAATGCAAGTAAATCAGCAGAAAAAGCTGGTGGTAGAATTGACTTTATGGATGACGAAACTGAGGCTCCAGAGGATAAATATGAATATGAAGATGGGATGGCACATGACACAAAGAAATCTGAATTAGTTCATCTTTCAAAGGAAGTGGGTACGACGACAGAAGAGAAATCAGAAGCAATCCATACAACGAAATACGAAGAAAGGCCGGGAAAGGTTGACAAAGATGGAACTAAGCAACAAAAAGCAGTTTGTAAGACCAATCTTGAGATATTGGAGTCAACTTCAAAGGTAAGAGAAAAGAGTAAACGGAAAAAGCGCCCCGCAGGAAGAACTAAGACAAAGACCGCCGCTCCCATGGATGTATCAAAATCTGACGAGGCTGTAGATGAGGTCAAGATTAATAATGACAGTAAAGATGAGGTGAAGATGGAATCCTTGGAAAAACTATCAGTTCCTGCTAGTATAAATAATGCTTCAACTTCCCTAACAAATGAGGCCGACAGTCTTCTTGAAGTAGATAAGGAGAACAGACCAATTGATGTAGAGCAGGATAAAGAGGTGGCCAAATGTGTTGGAAATTCAACAACTAAATCGAGCGTATGGCCAGCAAAGATCAACCAAAAGGCTAGAAAAGCAGGTCTTATTTCACCTATACAACAAGATAATAAAAGGGTGAAAACTAAACCTGTATGTTTTATATTAAGTGGACATCGCCCACAGAGAAAGGAGCTTCAGCAAATTATTAGGGGTTTAAAAGGAAGAGTTTGCCGGGATTCTCATCAGTGGTCATACCAGGCAACACATTTCATAGCCCCTGATCCTATACGCAGGACGGAAAAACTTTTTGCCGCTGCTGCGTCAGGAAGGTGGATTCTTAAAATGGATTACTTAACCGCCAGTAGGCAAGAAGGAAAATTCTTGGCGGAGGAGCCTTATGAGTGGCACAAGAACGGCCTCAGTGAGGATGGTGCTATCAATATGGAGGCTCCAAGAAAGTGGCGACTGTTGAGAGAGAGAACGGGTCATGGTGCCTTCTATGGAATGCGCATTATTATCTATGGGGATTGCATTGCCCCACCTTTGGATACTTTGAAGCGTGTAGTTAAAGCTGGAGATGGAACAATATTGGCTACGTCTCCTCCTTACACTCGCTTCCTTGATACTGGCATTGATTATGCTATAGTTAGCCCTGGCATGCCACGTGTTGATCTGTGGGTCCAAGAGTTCTTGAAGCATGAGATTCCCTGTGTTCTAGCAGACTACTTGGTCGAGTATGTATGCAAACCTGGGTTCTCCCTTGAGAAACATGTACTATTCGGGACTCATGCTTGGGCAGAAAGGTCATATTCCAACCTTCGAAGTAAGGCGGAAGAGATTATCGAAGATATCTTCCCTCCAGAAAATCCTAGTGAGAGTGATACAATTTGTCAAGTCTGTGGATCACGAGATAGAGGGGAGGTAATGCTGATTTGTGGTGATGATAGTGGTTCCGTTGGTTGTGGTATTGGCACCCATATCGATTGCTGTGATCCTCCGCTCAAAGATATTCCAGAAGAGGATTGGTTTTGTCCAAAATGCAGTAAAAGCTCAGAAGATTCAAACGCATCCAAGAGAACAAAAAAGAGAATCTTGTCCTCATCGAAGAGAAAGTGA 3729 0.4226 METSYRSQVFLGVHFVLFGFDPISENKVRFKLLNGGAVDVSQCSRSCTHVIVDKLVYDDPVCVAARNDGKILVTVLWVDHSADIGMPVDPTLIMYRPLKNLNGIPGAKNAIMCLTGYQRQDRDDIMTMVRLMGAEFSKPLVANKVTHLICYKFEGEKYELARKLKTIKLINHRWLEDCLKHWVLLPEDKYNKSGYELEMMEAEAKDSEEGGDSMQVHSGKRSINKSPLGSKIGLATTHEIAKSARVASNAFPDSTASKDLQEVNEVKSTPRSENRADQASSFDDVNDLKKRCQDREASRHATSCQLPDSKIKASEPRNTNVRMPFNFQDLGILENGNSSGQLSGVHVGTSESGKLVNDLMLTSESAERLVHSDAKVSPTSYSRKNARKFSLPRTSDESSGNVTCPSVSPLNDLKFGNDRETSSRKVENPRDRITSPCAEGSSKENNFIHGGESVSLLPQKRTTSSAKLKSRKISPDVKSSGGRISSTNGVTQGLKLISFTKEPPETEGDVSADKDGVNKPNTFSKIASSESAECDNAHQDLAQTSVKKGLSDSKIDDKLDKAGFVLGESVHDGNEIQPQNEKKDLQCSSPSNKKIRNDESSGLTSMDLCNKASTTLGKKSPRKKTLTKKSLGSRPKLRAATKQKGSVCLNKTSPQGDGVSFSSGCLETATCTAEKPPMSLRIVDVETSLERENASKSAEKAGGRIDFMDDETEAPEDKYEYEDGMAHDTKKSELVHLSKEVGTTTEEKSEAIHTTKYEERPGKVDKDGTKQQKAVCKTNLEILESTSKVREKSKRKKRPAGRTKTKTAAPMDVSKSDEAVDEVKINNDSKDEVKMESLEKLSVPASINNASTSLTNEADSLLEVDKENRPIDVEQDKEVAKCVGNSTTKSSVWPAKINQKARKAGLISPIQQDNKRVKTKPVCFILSGHRPQRKELQQIIRGLKGRVCRDSHQWSYQATHFIAPDPIRRTEKLFAAAASGRWILKMDYLTASRQEGKFLAEEPYEWHKNGLSEDGAINMEAPRKWRLLRERTGHGAFYGMRIIIYGDCIAPPLDTLKRVVKAGDGTILATSPPYTRFLDTGIDYAIVSPGMPRVDLWVQEFLKHEIPCVLADYLVEYVCKPGFSLEKHVLFGTHAWAERSYSNLRSKAEEIIEDIFPPENPSESDTICQVCGSRDRGEVMLICGDDSGSVGCGIGTHIDCCDPPLKDIPEEDWFCPKCSKSSEDSNASKRTKKRILSSSKRK 1242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02996 1242 MobiDBLite consensus disorder prediction 786 820 - -
Bach1g02996 1242 MobiDBLite consensus disorder prediction 479 495 - -
Bach1g02996 1242 ProSiteProfiles BRCT domain profile. 108 192 IPR001357 -
Bach1g02996 1242 Gene3D BRCT domain 98 223 IPR036420 -
Bach1g02996 1242 MobiDBLite consensus disorder prediction 368 535 - -
Bach1g02996 1242 MobiDBLite consensus disorder prediction 580 616 - -
Bach1g02996 1242 Pfam twin BRCT domain 111 174 IPR001357 -
Bach1g02996 1242 ProSiteProfiles BRCT domain profile. 924 1006 IPR001357 -
Bach1g02996 1242 PANTHER BRCA1 C TERMINUS DOMAIN CONTAINING PROTEIN, EXPRESSED 736 1233 IPR044254 -
Bach1g02996 1242 MobiDBLite consensus disorder prediction 570 645 - -
Bach1g02996 1242 MobiDBLite consensus disorder prediction 456 470 - -
Bach1g02996 1242 SUPERFAMILY FYVE/PHD zinc finger 1159 1221 IPR011011 -
Bach1g02996 1242 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1131 1234 IPR013083 -
Bach1g02996 1242 CDD BRCT_TopBP1_rpt7 923 996 - -
Bach1g02996 1242 MobiDBLite consensus disorder prediction 264 298 - -
Bach1g02996 1242 MobiDBLite consensus disorder prediction 617 631 - -
Bach1g02996 1242 MobiDBLite consensus disorder prediction 1218 1242 - -
Bach1g02996 1242 MobiDBLite consensus disorder prediction 417 432 - -
Bach1g02996 1242 Pfam BRCA1 C Terminus (BRCT) domain 926 992 IPR001357 -
Bach1g02996 1242 SUPERFAMILY BRCT domain 108 191 IPR036420 -
Bach1g02996 1242 SUPERFAMILY BRCT domain 7 91 IPR036420 -
Bach1g02996 1242 SUPERFAMILY BRCT domain 921 1010 IPR036420 -
Bach1g02996 1242 MobiDBLite consensus disorder prediction 375 410 - -
Bach1g02996 1242 MobiDBLite consensus disorder prediction 517 535 - -
Bach1g02996 1242 Gene3D BRCT domain 914 1032 IPR036420 -
Bach1g02996 1242 ProSiteProfiles Zinc finger PHD-type profile. 1165 1221 IPR019787 -
Bach1g02996 1242 Gene3D BRCT domain 1033 1130 IPR036420 -
Bach1g02996 1242 Pfam PHD-finger 1167 1220 IPR019787 -
Bach1g02996 1242 SMART PHD_3 1167 1219 IPR001965 -
Bach1g02996 1242 MobiDBLite consensus disorder prediction 204 228 - -
Bach1g02996 1242 Gene3D BRCT domain 1 94 IPR036420 -
Bach1g02996 1242 SMART BRCT_7 915 996 IPR001357 -
Bach1g02996 1242 SMART BRCT_7 7 85 IPR001357 -
Bach1g02996 1242 SMART BRCT_7 105 182 IPR001357 -
Bach1g02996 1242 SMART BRCT_7 1034 1121 IPR001357 -
Bach1g02996 1242 MobiDBLite consensus disorder prediction 252 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02996 Bach-Chr1 39937935 39943298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02996 128 242 Core DNA Replication Machinery Family AT4G02110 62.609 5.00e-39 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach1g02996 BRCT 1.9e-07 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02996 K10728 - qsa:O6P43_007236 1127.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g02996 1 39937935 39943298 Bach1g02996 1 39937935 39943298 ECH