Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02970 ATGTGTGGCGGTGCTATCATCGCTGACTTCATTCCTCAACACAGGGGTCGCCGCCTTTCCGCTTCCGATCTCTGGCCCAATTCATTTGGAAAGCAGAATGATTCCGACTTCGATTATTCTCAATTGGATCAGGAGCACTCGATTCCCCTGAAAAGACCCCAACCTTCCTCAGTTAATGAACAAGTGGAGAAGCCCGTAAAGAGGCAGAGGAAGAACCTTTACAGAGGTATTCGGCAGCGTCCATGGGGTAAATGGGCTGCTGAGATTCGTGATCCCAGGAAAGGAGTACGAGTTTGGCTTGGTACCTTCAACACTGCCGAAGAAGCTGCTAGGGCCTATGACAGAGAAGCTCGCAAAATCCGTGGCAAGAAGGCCAAAGTAAATTTTCCTAACGAAGACGACGAGTACTCCATTCAAGCTCGTCCTAATCCACCGCCTCCACTCCGACGCCCAAATCATACTCTTTATCAACAGTACGGTTTTAATTTGAATGATGTACCCAAAGGCCTGAATTTGGAATGTGGTTATGATCTGAACCAAGTTGGAGCAATTCCTTCCAGTGGGTTCGAGACTGTTAATGCTAACAACACTGACCCAATCGTTATTTCTGGCGATGAAAATTCTGGTAGTGGTTTAGGTTCAGATGGTGCTTACTCAACGACTGAATTCATGGGCTCGAACCAGAAAATAAACAATTGTGTTCCTCAGCTGAAGATGAATGGGAAAGAATCAAAGAAGGAAGAAAAGATAAACAAGGAAGTGACTGAAGCTCGAGAGGAAGAGAACCAAGTGCAGAAGCTGTCTGAGGAGTTGATGGCGTTCGAGAACTACATGAAGTTTTTTCAGATCCCGTACTATGATGGCCAATCGGCAGCGCCGAATGACGTTCAGGAAAGCGTGGTTGATGGTCTCTGGAGCTTCGATGATGAGTGCGTTCCTGCTTCTGTGAGCTCATCAGCAGTCTGA 966 0.47 MCGGAIIADFIPQHRGRRLSASDLWPNSFGKQNDSDFDYSQLDQEHSIPLKRPQPSSVNEQVEKPVKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNEDDEYSIQARPNPPPPLRRPNHTLYQQYGFNLNDVPKGLNLECGYDLNQVGAIPSSGFETVNANNTDPIVISGDENSGSGLGSDGAYSTTEFMGSNQKINNCVPQLKMNGKESKKEEKINKEVTEAREEENQVQKLSEELMAFENYMKFFQIPYYDGQSAAPNDVQESVVDGLWSFDDECVPASVSSSAV 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02970 321 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Bach1g02970 321 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Bach1g02970 321 FunFam Ethylene-responsive transcription factor 2 72 131 - -
Bach1g02970 321 MobiDBLite consensus disorder prediction 48 70 - -
Bach1g02970 321 SUPERFAMILY DNA-binding domain 73 131 IPR016177 GO:0003677
Bach1g02970 321 Coils Coil 243 277 - -
Bach1g02970 321 Gene3D AP2/ERF domain 73 131 IPR036955 GO:0003700|GO:0006355
Bach1g02970 321 SMART rav1_2 73 136 IPR001471 GO:0003700|GO:0006355
Bach1g02970 321 ProSiteProfiles AP2/ERF domain profile. 73 130 IPR001471 GO:0003700|GO:0006355
Bach1g02970 321 CDD AP2 74 131 IPR001471 GO:0003700|GO:0006355
Bach1g02970 321 PANTHER DNA-BINDING DOMAIN 47 270 IPR044808 GO:0003700|GO:0009873
Bach1g02970 321 Pfam AP2 domain 74 122 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02970 Bach-Chr1 39775680 39776737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02970 1 131 AP2-EREBP Transcription Factor Family AT3G16770 55.147 6.52e-43 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach1g02970 AP2 9.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02970 K09286 - qsa:O6P43_010814 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g02970 1 39775680 39776737 Bach1g02970 1 39775680 39776737 ECH