Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02965 ATGGCTTCTAAGATATCTTGTTTTGCTACATTGGCATTGCTCTTTGTCCTTCCCTTGCTTGCATTACAAGCAAATGCAGATATCTCTGTGAGTGTGACCACCCCTGTTGAGCCAGGAACCATTTGCGAGTCCACCCAGTTTCCATCTTATTGCAAAGCCATGCTTCCTAAGCAACATGATCAAGTCCAGGGCTTTGGCAGGTTCTCTCTCCAAAAATCCTTACTTCAATGCCGTAAGTTCTCCAACTTGGTGAACTCTTACCTTGGTGGCAAGTCCAGATTCTCTGAAAGGACAGTTCGTGCATTGGGAGATTGCCAATTTCTTTCTCAGCTCAACGTTGACTACTCGACAAAGTCCAATAAGTTTGTAACCAAGGCTAGTAAAGCTCTTTCTGATTCTGAAGCTGATTATGCCCAAACCTTGCTCAGTGCCATCTTAACTAACCAACAGACTTGTCTGGAGGGATTAACGACCACGGCTTCTGATTTGAGCATAAAGAATGGGCTTTTCGGCCCACTCTCTAATGACAGTAAGCTCCACAGTCTATCTTTGGCTCTGTTCACAAAGGGTTGGGTGCATAAGAAGAATGCTCCAATAACATGGGGTTCCCAAGGATGGCACCTAGGTTTCAGAAATGGTCGATTACCTCTAAAGATGTCAAAAAGAATACGGGCCATTTATGAATCAGTGAGAGGCAGAAGAGGCAGGAGAAAGCCTAATGACCACGATGATGATAATGAAGATAAAGATAGTGTTTTGATTAGTGATATTGTGGTTGTGAGTCAAGATGGAAGTGGAAACTTCACCACTATAAACGATGCTGTCGCTGCAGCTCCAATTAACTCTAATGGAACCAATGGCTATTACTTGATTTATATCACAGAGGGTGTCTATGAAGAATACGTGTCCATCCCCATAAACCAGCCCTATTTGATGATGATCGGAGATGGAATCAATCGTACAATTTTCACAGGCAACCGCAGCGCCGGTGATGGATGGACAACATTCAATTCAGCCACATTTGGTAAGCAAACATTATATTAG 1044 0.433 MASKISCFATLALLFVLPLLALQANADISVSVTTPVEPGTICESTQFPSYCKAMLPKQHDQVQGFGRFSLQKSLLQCRKFSNLVNSYLGGKSRFSERTVRALGDCQFLSQLNVDYSTKSNKFVTKASKALSDSEADYAQTLLSAILTNQQTCLEGLTTTASDLSIKNGLFGPLSNDSKLHSLSLALFTKGWVHKKNAPITWGSQGWHLGFRNGRLPLKMSKRIRAIYESVRGRRGRRKPNDHDDDNEDKDSVLISDIVVVSQDGSGNFTTINDAVAAAPINSNGTNGYYLIYITEGVYEEYVSIPINQPYLMMIGDGINRTIFTGNRSAGDGWTTFNSATFGKQTLY 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02965 347 SMART PMEI_2 33 186 IPR006501 GO:0004857
Bach1g02965 347 Gene3D - 252 345 IPR012334 -
Bach1g02965 347 Pfam Pectinesterase 258 343 IPR000070 GO:0030599|GO:0042545
Bach1g02965 347 CDD PMEI-like_3 40 191 - -
Bach1g02965 347 SUPERFAMILY Pectin lyase-like 254 341 IPR011050 -
Bach1g02965 347 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 189 IPR035513 -
Bach1g02965 347 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 189 IPR035513 -
Bach1g02965 347 PANTHER PECTINESTERASE 24 342 - -
Bach1g02965 347 Pfam Plant invertase/pectin methylesterase inhibitor 40 185 IPR006501 GO:0004857
Bach1g02965 347 FunFam Pectinesterase 39 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02965 Bach-Chr1 39732242 39733285 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02965 10 342 Carbohydrate Esterase AT4G02330 49.714 1.69e-97 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02965 K01051 - qsa:O6P43_007198 371.703