Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02962 ATGGCTTCTTCCAAGATCTATTCCCTCCCAAGAATTGCATTTCTTGTTCTACTATCCTTCTTTGCCTATGTAGCTTCTGCAGATACCTCCACTCCCAGTCCCACCGCTTCTGTCTCGACTGGCACCGTTTGCCAATCTACCCCTGATCCATCTTATTGCAAATCAGTCCTCCCTCCTCAAAACGGCAACGTTTACGACTATGGCCGGATTTCAGTTAAGAAGTCATTATCCCAAGCCCAAAAATTCTTGAACTTGGTTGACCAATACCTCCGGCGACAATCTACGTTGTCTATCTCCGCCGTTCGTGCATTGCAAGATTGCCGGACACTTGGAGAGCTGAACTATGATTTCCTTTTGAGTTCTTTTCAAACTGTGAACAAGACAGCGAAGTTTCTCCCTAGTTTGCAAGCAGACAATATCCAAACTCTGCTAAGTGCAATCCTAACCAACCAGCAAACCTGCTTGGATGGCCTTAAAGACACCGCTTCGGCTTGGAGCGTCAGAAATGGGCTCTCTGTACCGCTTTCTAATGACACCAAGCTCTACAGTGTCTCTCTGGCTTTATTCACAAAGGGTTGGGTTCCAAAAACTAAGATGAAACCCAATGCAGGTGGGTTGCCACGGACAAATAATAGGAAACTAATTGGTTTCCGAAATGGGCATTTGCCCCTTAAGATGTCAAGCAGAACCCAAGCCATCTACGAGTCTGTGAGTCGAAGGAACCTGCTTCAGACCATGGTGGGTGAGAGTGTTTTGGTCAAAGACATGGTGACGGTGAGTCAAGATGGAAGTGGAAACTTCACAACCATCAATGACGCCCTCGCCGCAGCTCCAAACAGGTCTTCGAAGTCAGACAGTAGTGGCTACTACCTCATCTATGTCACTGCAGGTGTCTACGAAGAAAACGTGTCCATTGATAAGAAAAAGCGGTACCTCATGATGATTGGAGACGGCATCAACAAGACAATCATCACGGGCAATCGCAGTGTCGTTGATGGCTGGACAACCTTCAACTCCGCAACATTTGCTGCGGTTGCTCCTGGATTCGTGGCTGTGAATATGACTTTCCGTAACACTGCCGGCCCAAGCAAGCACCAGGCGGTTGCAGTTCGGAATGGAGCTGATTTGTCCACGTTTTACAGCTGCAGCTTCGAGGGGTACCAGGATACCTTATATACACACTCTCTCAGACAATTCTACAGAGACTGTGACATTTACGGAACGGTTGATTTCATTTTCGGAAACGCCGCCGTTGTTTTCCAGAACTGCAACCTTTATGCCCGTCTACCCATGAGTGGACAATTCAATGCCATCACTGCTCAAGGTCGAACCGACCCGAATCAGAATACTGGTACTTCGATCCATAACTGCGTCATTAGAGCTGCTGATGATTTGGCTGCTAGCGGTGGAGCAGCTGCAACTTATTTGGGAAGGCCATGGAAGCAGTATTCAAGGACGGTTTATATACAGACATTCATTGATGGTCTGGTGGATGCTGCGGGTTGGCGTGCATGGGATGGTGATTTTGCATTAAGTACATTGTACTATGCTGAGTTTAACAACAGTGGTCCCGGGTCGGACACATCTAAACGGGTCACATGGGCGGGTTACCATTTGATTAACGCTGCGGATGCCGGCAACTTCACGGTGTCTAACTTCTTGCTAGGGGATGATTGGTTGCCCAAGACAGGAGTCACCTACGATAGCAGCTTAATATGA 1719 0.4782 MASSKIYSLPRIAFLVLLSFFAYVASADTSTPSPTASVSTGTVCQSTPDPSYCKSVLPPQNGNVYDYGRISVKKSLSQAQKFLNLVDQYLRRQSTLSISAVRALQDCRTLGELNYDFLLSSFQTVNKTAKFLPSLQADNIQTLLSAILTNQQTCLDGLKDTASAWSVRNGLSVPLSNDTKLYSVSLALFTKGWVPKTKMKPNAGGLPRTNNRKLIGFRNGHLPLKMSSRTQAIYESVSRRNLLQTMVGESVLVKDMVTVSQDGSGNFTTINDALAAAPNRSSKSDSSGYYLIYVTAGVYEENVSIDKKKRYLMMIGDGINKTIITGNRSVVDGWTTFNSATFAAVAPGFVAVNMTFRNTAGPSKHQAVAVRNGADLSTFYSCSFEGYQDTLYTHSLRQFYRDCDIYGTVDFIFGNAAVVFQNCNLYARLPMSGQFNAITAQGRTDPNQNTGTSIHNCVIRAADDLAASGGAAATYLGRPWKQYSRTVYIQTFIDGLVDAAGWRAWDGDFALSTLYYAEFNNSGPGSDTSKRVTWAGYHLINAADAGNFTVSNFLLGDDWLPKTGVTYDSSLI 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02962 572 PANTHER PECTINESTERASE 20 561 - -
Bach1g02962 572 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 191 IPR035513 -
Bach1g02962 572 ProSitePatterns Pectinesterase signature 2. 405 414 IPR033131 -
Bach1g02962 572 Pfam Plant invertase/pectin methylesterase inhibitor 42 188 IPR006501 GO:0004857
Bach1g02962 572 SUPERFAMILY Pectin lyase-like 253 568 IPR011050 -
Bach1g02962 572 Gene3D - 251 571 IPR012334 -
Bach1g02962 572 NCBIfam pectinesterase inhibitor domain 13 189 IPR006501 GO:0004857
Bach1g02962 572 Pfam Pectinesterase 257 557 IPR000070 GO:0030599|GO:0042545
Bach1g02962 572 FunFam Pectinesterase 250 571 - -
Bach1g02962 572 CDD PMEI-like_3 42 193 - -
Bach1g02962 572 SMART PMEI_2 33 188 IPR006501 GO:0004857
Bach1g02962 572 FunFam Pectinesterase 41 191 - -
Bach1g02962 572 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 191 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02962 Bach-Chr1 39713251 39715159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02962 12 572 Carbohydrate Esterase AT1G02810 62.823 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02962 K01051 - gmx:100792319 876.7