Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02959 ATGGGTATCGATTTAAAAGCCGGTGGCAAGAGCAAGAAGACCAAGCGAACCGCTCCCAAATCCGATGATATTTACCTGAAGCTCCTAGTCAAGCTTTACCGGTTTCTTGTTCGAAGGACTGGGAGTAAATTCAATGCAGTGATACTGAAGCGGCTCTTCATGAGCAAAGTCAACAAGCCTCCTCTATCTCTCTCCAGATTGATTCGTTTCATGCAGGGCAAGGAGGACAAGATCGCTGTGGTTGTTGGGGCTGTGACTGATGACATTCGTGTATACGAGGTTCCTGCACTAAAGGTAACTGCCTTGAGGTTCACAGAAACTGCAAGAGCTAGAATTGAGAAGGCTGGCGGAGAGTGCCTGACATTTGATCAGCTGGCTCTCAGAGCTCCTCTAGGCCAGAACACGGTTCTTCTTAGAGGTCCTAAGAATGCCCGTGAAGCGGTCAAGCACTTTGGACCTGCTCCTGGTGTGCCACATAGCCACACCAAGCCCTTTGTCCGTTCAAAGGGAAGGAAATTTGAGCGGGCCAGAGGTAGAAGGAACAGTAAAGGCTTCAGAGTTTGA 564 0.4929 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKPPLSLSRLIRFMQGKEDKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPFVRSKGRKFERARGRRNSKGFRV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02959 187 Gene3D - 1 187 - -
Bach1g02959 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Bach1g02959 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Bach1g02959 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 187 IPR000039 GO:0003735|GO:0005840|GO:0006412
Bach1g02959 187 FunFam 60S ribosomal protein L18 1 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02959 Bach-Chr1 39700648 39702643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02959 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 79.570 1.80e-105 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02959 K02883 - pop:7487794 358.221