Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02937 TCTACAGTAAAAGGCCAGAGGAATAATTGTGTTCGTCGATCGATGTTTCTGAGAGAAAATGAAGTTCTGCAAAAAATACCAGGAGTACATGCAAGGTCAGGAGAAGAAACTACCTGTGGTTGGCTTCAAGAAGCTCAAGAAAATATTGAAGAAGTGCAGAAGACAAGGTCAATCCCAGAATGGCTTTAATGAAGCCCTTGACGTCCAAACCTGCGCCGATAACAATTGCCCAGTTTGTGATAGGACCTTCTTTCCTTCTCTTCTCAATGAAATGTCACAAGTAGTAGGCTGCTTCAACCATCGTGCACAGAAATTGCTGGAGCTTCATCTTGCTTCTGGATTCAGAAAGTACTATTTCTGGGTCAAAGGCAAGTGGCAACGGGACCATGCAGCTCTAACTCAAGAAGGTAAAGACTTGGTTATTTATGCACTGATAAATGCCGTGGCAGTTCGCAAAATACTGAAGAAATATGATAAGATTCATGTTTCCAAGCAAGGGCAATTGTTTAAGTCACAAGCACAGAAGATGCACATGGAAATTCTTAAGAGTCCCTGGCTTTGTGAGCTTATGGCCTTCCACATTAATTTGAGGGAAACCAAGCCCAATTTAAGGAACGCATCTGCTTTATTTGATGGATGTTCCCTTGAAATTAATGATGGAAAACCATCACTTACTTGTGAGCTCTTTGATTCTATCAAGCTTGATGTTGACTTGAATTGCTCTATTTGCTTGGAGACGGTATTTGATCCAGTTTCTCTTACTTGTGGCCATATATTCTGTTACGTGTGTGCTTGCTCTGCTGCCTCAGTAAGTATTGTTGATGGACTTAAGACAGCGAATCCTAATGAAAAATGTCCTCTATGCCGGGAGGGAGGAGTTTATGAAGGTGCTGTTCACTTGGAAGAATTAAGTATTCTCTTAAGGCGAAGCTGCCAGGACTACTGGGAAGAAAGGCTTCAGGCGGAGAGGGTTGAGAGGGTGAAGCAAATCAAGCAGCACTGGGACACTCAGTGCAGGGCATTTATAGGCGTCTGAGTTGAGAAGCAACATTGTTCTTTGGTGGTGTCCCATGTTAGTTTTAGGCAAAACAGTAATTCTTTTATTTTGCTGTGTTGTATTCAACCATCAGAATAACGTTTCTTTTTTTGGTTTCTCATGAGATGGTTCCTGAGACTAATCCTTGCTTAGGCTTAAGCATACCCCACACTATGCATCGCTTACCAACTGTGTGAAGCTGTTTGTAAGTTATATTTGACATGTTCTTG 1266 0.4179 MKFCKKYQEYMQGQEKKLPVVGFKKLKKILKKCRRQGQSQNGFNEALDVQTCADNNCPVCDRTFFPSLLNEMSQVVGCFNHRAQKLLELHLASGFRKYYFWVKGKWQRDHAALTQEGKDLVIYALINAVAVRKILKKYDKIHVSKQGQLFKSQAQKMHMEILKSPWLCELMAFHINLRETKPNLRNASALFDGCSLEINDGKPSLTCELFDSIKLDVDLNCSICLETVFDPVSLTCGHIFCYVCACSAASVSIVDGLKTANPNEKCPLCREGGVYEGAVHLEELSILLRRSCQDYWEERLQAERVERVKQIKQHWDTQCRAFIGV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02937 325 ProSiteProfiles SPX domain profile. 1 152 IPR004331 -
Bach1g02937 325 CDD RING-HC_BAH1-like 211 284 - -
Bach1g02937 325 ProSiteProfiles Zinc finger RING-type profile. 221 270 IPR001841 -
Bach1g02937 325 SUPERFAMILY RING/U-box 214 272 - -
Bach1g02937 325 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 208 323 IPR013083 -
Bach1g02937 325 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 324 IPR033326 -
Bach1g02937 325 Pfam Zinc finger, C3HC4 type (RING finger) 218 271 - -
Bach1g02937 325 ProSitePatterns Zinc finger RING-type signature. 236 245 IPR017907 -
Bach1g02937 325 SMART ring_2 221 269 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02937 Bach-Chr1 39590578 39593436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02937 218 270 C3H Transcription Factor Family AT4G28270 39.655 2.51e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02937 K16275 - gmx:100797432 542.347