Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02920 ATGAGTGATAACATATGCAAAACCCCAAATACAGAAGGTTTTAAGTACGATTTCACAGGAGCAGCTGGTACAAGTAGCGGCGGCTCTGCTCAAGATGAAGTCATCAAGCAGCAAGATCGATTGCTTCCAATAGCTAACGTGGGGAGGATTATGAAGCAGATCCTTCCCCCCAACGCTAAGATCTCAAAGGAAGCCAAAGAAACCATGCAAGAATGTGTGTCTGAGTTCATAAGCTTTGTTACTGGGGAAGCATCTGACAAGTGTCACAAGGAGAAGCGCAAGACAGTGAATGGCGATGATATTTGCTGGGCTTTGGCTGCTCTAGGGTTTGATGACTACACTGAGCCACTGAAAAGGTATTTGAATAAGTATAGGGAATCAGAGGGGGAAAGAGCTAACCAAAATAAAGCAAACAGTGATGAAAATAATGAAACAGCTGCTGCTGGGGACAACGTTAATGGCTCTCAGTCCTGGAAATTTTCTAACTTCTAG 492 0.439 MSDNICKTPNTEGFKYDFTGAAGTSSGGSAQDEVIKQQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALAALGFDDYTEPLKRYLNKYRESEGERANQNKANSDENNETAAAGDNVNGSQSWKFSNF 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02920 163 FunFam Nuclear transcription factor Y subunit B-3 30 155 - -
Bach1g02920 163 Coils Coil 117 137 - -
Bach1g02920 163 MobiDBLite consensus disorder prediction 138 163 - -
Bach1g02920 163 SUPERFAMILY Histone-fold 38 145 IPR009072 GO:0046982
Bach1g02920 163 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 27 149 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bach1g02920 163 MobiDBLite consensus disorder prediction 126 163 - -
Bach1g02920 163 ProSitePatterns NF-YB/HAP3 subunit signature. 72 88 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bach1g02920 163 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 41 105 IPR003958 -
Bach1g02920 163 Gene3D Histone, subunit A 29 159 IPR009072 GO:0046982
Bach1g02920 163 PRINTS CCAAT-binding transcription factor subunit A signature 107 125 - -
Bach1g02920 163 PRINTS CCAAT-binding transcription factor subunit A signature 88 106 - -
Bach1g02920 163 PRINTS CCAAT-binding transcription factor subunit A signature 69 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02920 Bach-Chr1 39435446 39435937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02920 34 135 CCAAT-HAP3 Transcription Factor Family AT2G47810 80.392 5.31e-60 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bach1g02920 CBFD_NFYB_HMF 1e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02920 K08065 - gmx:100817274 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g02920 1 39435446 39435937 Bach1g02920 1 39435446 39435937 ECH