Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02918 ATGAAGGAAGTTTCTCCTCAGGAAACACTGGGGAAGAAGTCCATCAAGAAAACGAGCAACAACAGCCACAGAACCACTTGCACAGCTCTAGTTCAGGACCTTCTGGTGCTTGCAACAGCAATGGCTCTTCTAATCAGCAGCAACAACAGCGGGCTAAAAAGAAACGAAATCTTCCTGGAACTCCAGGCATGCAAATTCAACTACCTTAATTATTATCCGAATGCTGAAGTTATTGCTTTATCACCAACCACATTAATGGCAACAAATAGATTCGTCTGTGAGATCTGCAACAAAGGGTTCCAGAGGGACCAAAACCTTCAGTTGCACCGGAGAGGTCACAATCTTCCATGGAAACTGAGGCAGAGAACGACCGCTGAGGTCAAGAAACGGGTCTATGTATGCCCTGAACCATCATGCGTCCACCATAACCCGGCTCGTGCATTGGGAGACCTCACTGGTATCAAAAAGCATTATAGCAGGAAACATGGCGAGAAGAAGTGGAAGTGTGACAAATGCTCCAAAAAATATGCAGTGCAATCTGATTGGAAAGCCCACCAGAAAACCTGTGGTACAAGAGAATATAAATGTGACTGTGGAACCATTTTTTCCAGGAGAGATAGTTTTATCACCCACAGAGCTTTTTGTGATGCATTAACTGAGGAAAACAACAGAGTGAACCAGGGATTAAGCAGTGGAATGCCACCAAACTTGCAAACTCAAATGCCAGATCTTATGTCTACAATGCCTATGAGCACCTGTTCCAACACAGCATCTGAATATGGCAACTACGATCCCAAGAACCCAATGAAATCTCTGCCCCAAGAACTTGTCTCTATGCCATTTAATCCCATGAGCATGGGTGGGGGCATGTTCTCGACAAGTTCAGGTTCACTTTTTGGTGGTCCAAAAAGCAATTCCCCCTCCTCTTCTACTCTTCAGCTCAGTTCCAACAGCTCCTCTGGCCTCAATTACTTCCCAGACAGCAAAAATGGAGGACTAATATCCGGGTCAGCCCACATGTCAGCAACAGCTTTATTACAGAAAGCAGCTCAAATGGGTGCTACTGCAAGCAATAGCATTAACTCTCCCATGATGCAGAAAAGCTTTGTAAGTAGCATCGCTGGTCCTGACCCAATTAGACCACCACCATATTCTGGTGCTATGCAGCATCTTAACCCCTCATACGACCACTTCCATCCTCACCCTGATCAATCTCACATGGCTGGGATTAATGGTAGTGGAGCATTCACTAGCCCATTGTTTCAGAAGGGCCCACAAGAAATATCACAACTACTTGACCCTGATACTCCTGGACCAACAATGAATGAGATGGGAATGTTCACCCAAATATTCAATATCGGCAATGATCATAACCAAGGATTAATGAAGAATATGGAACGAGAAGCTAGTAATAGTTCGAGTTTGATCCATGGAAGAGACGCAGCAGAAGGGAACCCAATGGGGCAATCAAGGTTTGGAGGGAGTGACATGACAACGGTTCATGACTTTTTGGGTGTTGGGGTTCCAAATTCAAGTGCAGGGAATTTGCATGAATCACAACAGCATCAACAACAAAGACTGGAGTTGGAAGCAATAAACCAGCAGAGGTTACCACTTATCAATCACTTTCACCCTCACCTTCCTCATGGTGATTCAACTGTGGAGAAACCCATTTGGGATGTGTGA 1686 0.4496 MKEVSPQETLGKKSIKKTSNNSHRTTCTALVQDLLVLATAMALLISSNNSGLKRNEIFLELQACKFNYLNYYPNAEVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTAEVKKRVYVCPEPSCVHHNPARALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRRDSFITHRAFCDALTEENNRVNQGLSSGMPPNLQTQMPDLMSTMPMSTCSNTASEYGNYDPKNPMKSLPQELVSMPFNPMSMGGGMFSTSSGSLFGGPKSNSPSSSTLQLSSNSSSGLNYFPDSKNGGLISGSAHMSATALLQKAAQMGATASNSINSPMMQKSFVSSIAGPDPIRPPPYSGAMQHLNPSYDHFHPHPDQSHMAGINGSGAFTSPLFQKGPQEISQLLDPDTPGPTMNEMGMFTQIFNIGNDHNQGLMKNMEREASNSSSLIHGRDAAEGNPMGQSRFGGSDMTTVHDFLGVGVPNSSAGNLHESQQHQQQRLELEAINQQRLPLINHFHPHLPHGDSTVEKPIWDV 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02918 561 Gene3D Classic Zinc Finger 146 225 - -
Bach1g02918 561 MobiDBLite consensus disorder prediction 295 319 - -
Bach1g02918 561 MobiDBLite consensus disorder prediction 1 20 - -
Bach1g02918 561 SMART c2h2final6 132 162 IPR013087 -
Bach1g02918 561 SMART c2h2final6 167 187 IPR013087 -
Bach1g02918 561 SMART c2h2final6 91 113 IPR013087 -
Bach1g02918 561 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 70 524 IPR031140 -
Bach1g02918 561 FunFam protein indeterminate-domain 5, chloroplastic-like 145 224 - -
Bach1g02918 561 FunFam protein indeterminate-domain 12-like 70 138 - -
Bach1g02918 561 ProSitePatterns Zinc finger C2H2 type domain signature. 93 113 IPR013087 -
Bach1g02918 561 Gene3D Classic Zinc Finger 74 136 - -
Bach1g02918 561 SUPERFAMILY beta-beta-alpha zinc fingers 90 188 IPR036236 -
Bach1g02918 561 Pfam Zinc finger, C2H2 type 91 113 IPR013087 -
Bach1g02918 561 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 113 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02918 Bach-Chr1 39418895 39421247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02918 73 357 IDZ Gene Family AT3G50700 55.229 9.19e-105 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach1g02918 zf-C2H2 0.0058 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02918 - - qsa:O6P43_010738 691.034