Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02907 GTATAACAGTGAGCTCGGTGGTCGCGAACGCGATAGCATCTGAATTTGTTTGTCTGGCCCTTCAGATTTCCCTTTCTCAATCGAGCTACTTGTTCTCTGTTCAGCAACTTGGATACTCGATCAGTTGTGTGTTTCTCCCTCGCCCTAAACTCAATCCCAACCAATGGAAGACTCTGCAACTCAAGGGAGAGAACACGTCGGAAAGTTGCAGTATGGATGTGAGCACTATAAGAGACGATGCAAAATTCGAGCCCCGTGTTGCGATCAGATCTTCCCATGTCGTCACTGCCACAATGAGGCCATGAGCTCACTTAGCAACCCCAAAGATCATCACGAACTTGTCAGGCACGATGTTAAGCAAGTTGTGTGTTCTATCTGTGACACAGAGCAGGAGGTTGCCAAGAAGTGTTCTAATTGTGGTGTCAACATGGGAGAATATTATTGTGAGATTTGCAAATTCTATGATGATAAAACAGATAAAGGGCAATTCCATTGTGATGACTGTGGAATTTGCAGGGTTGGTGGACGCGATAACTTCTTTCACTGTCAAACATGTGGATCTTGCTATGCAGTGAGCTTGCAAAACAATCACTTATGTGTAGAGAACTCGATGAAGAGTCACTGTCCTGTCTGTTATGAGTATCTGTTTGATTCAATTAAAGGCACCACAATTATGAGGTGTGGTCACACAATGCATATGGAATGCTTTCAAGAAATGGCAACTCAAAACCAGTATCGCTGCCCTATATGCTCAAAGACGACAATATTTGATATGGCTGAAGACTGGAGATATTTAGATCGGGAGATTGAAGCCGTTCCCATGCCCGAGGAGTATAATTTTGAGGTCACAAGTGCAGACAATGCGGTTCCTATAACACCCGTAGGATTTCAACACCTAAGCGTGGATGAAGGGTGTATATGCAGTTTCTTTTTCTTCCCTACCCCCTCCACCAAGAGGAAGAGAGTTATTCTGTAA 976 0.4406 MEDSATQGREHVGKLQYGCEHYKRRCKIRAPCCDQIFPCRHCHNEAMSSLSNPKDHHELVRHDVKQVVCSICDTEQEVAKKCSNCGVNMGEYYCEICKFYDDKTDKGQFHCDDCGICRVGGRDNFFHCQTCGSCYAVSLQNNHLCVENSMKSHCPVCYEYLFDSIKGTTIMRCGHTMHMECFQEMATQNQYRCPICSKTTIFDMAEDWRYLDREIEAVPMPEEYNFEVTSADNAVPITPVGFQHLSVDEGCICSFFFFPTPSTKRKRVIL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02907 270 Pfam CHY zinc finger 19 99 IPR008913 GO:0008270
Bach1g02907 270 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 7 228 - -
Bach1g02907 270 SMART ring_2 154 196 IPR001841 -
Bach1g02907 270 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 143 217 IPR013083 -
Bach1g02907 270 ProSiteProfiles Zinc finger CHY-type profile. 12 87 IPR008913 GO:0008270
Bach1g02907 270 Pfam Ring finger domain 153 196 IPR001841 -
Bach1g02907 270 SUPERFAMILY CHY zinc finger-like 15 88 IPR037274 GO:0008270
Bach1g02907 270 CDD RING-H2_Pirh2-like 153 197 - -
Bach1g02907 270 SUPERFAMILY Zinc hairpin stack 90 147 IPR037275 -
Bach1g02907 270 ProSiteProfiles Zinc finger RING-type profile. 154 197 IPR001841 -
Bach1g02907 270 ProSiteProfiles Zinc finger CTCHY-type profile. 89 153 IPR017921 -
Bach1g02907 270 SUPERFAMILY RING/U-box 153 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02907 Bach-Chr1 39328146 39331462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02907 17 224 C2H2 Transcription Factor Family AT3G18290 42.991 6.55e-45 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02907 K10144 - qsa:O6P43_007118 442.195