Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02906 CCTTTGCGCTGTCTCAAAGCTATTTGGGCATTTCCCGAGTCAAGATCCCCTTCACCTTTTCTTTAGTAGACCTTTGCCTCTTAAACTTGACGCAACACAGATTTTTTGGGAACGCAGTACAGTATCCATAAACGGCAGAGGAGGAACAAGCAGAAGCTATGAGCAATTCTCCAAGACACCCACATCCTTCGTGTAAAGATCAAAAGCAGCGAGTCTGTGACTATTGTGGAGGCTCCACTGCTCTCCTCTATTGCCGAGCTGATTCTGCAAAGCTTTGTCTCTCTTGCGATCGAGAAGTTCACTCCACCAACCAGCTTTTCTCAAAGCACACTCGCGCTCTCCTTTGTGACGCTTGTGATGTGTCCCCTGCTACGATATTCTGTTCTACAGAAAGCTCTGTTCTTTGCCAGAATTGCGACTGGGAAACGCACAATTTGGCGCTGTCTTCGGTGCATGACCGAAGGCCTCTCGAGGGTTTCACTGGGTGCCCTTCTGTAAATGAATTTTTAACAATACTCGGATTTGAAGATTTGGGGAAAAAAGCTTTGCTTTTGTCTCATGAAAGCAGTGGTCGTGGCTGTGGCAGAGACGCTGCTGCTGCCAGTCATGGGTTTCTGGGGTCTGAGCTTGAAGGCTTGTCGGATTTGTTGGTTTGGGATGCTCCTGCTGTTGTTAGTCTTGATGATTTGATTGCTTCCACCGGATCGTCTCATAATTACCAAGCTATGGAGGTTCCTCCTTTGCCTAAGAATCGCAAGGCTGCTTGTGGGCGACAGAAAGAAGAAATTATCACTCAGCTTCGTGAACTAGCAAAGTTGGAACCCAATTTGAATGATGATGTAGATGCAGATGCTGAGCGCTTGAGCAATATGCATCCATTGGTGCCTGACCAATGTGTGCACTCACGAGATTTGGCCACTGGTTTTGAACGTGATATTGAGGCTAATATATGTCCTACTTATGAGGTAGGTGATTTTCGGTGGCACAAGAATAGCAGTGAGTCTGCAAATCAAGTTGTTCCTCCTAATACGACATTAGGAACTTATTCAGAGGATGTTCTCGACAAACATTCAATTTCTGCTGTGTACAATGGAGGGCAAACACCAAATTATCTTAAATGTGAATCCTTATCAACTACACCTAAGGTTGCCTCGTATGAGTTAACGAGCCAAGAGAGAGATTCTGCAATATTGCGGTATAAGGAGAAGAAGAAAACAAGAAGATATGACAAGCACATAAGATATGAATCACGAAAGGTTCGGGCAGAAAGCAGGACAAGAATAAAGGGCCGATTTGCCAAGATTGAACACTAA 1313 0.4501 MSNSPRHPHPSCKDQKQRVCDYCGGSTALLYCRADSAKLCLSCDREVHSTNQLFSKHTRALLCDACDVSPATIFCSTESSVLCQNCDWETHNLALSSVHDRRPLEGFTGCPSVNEFLTILGFEDLGKKALLLSHESSGRGCGRDAAAASHGFLGSELEGLSDLLVWDAPAVVSLDDLIASTGSSHNYQAMEVPPLPKNRKAACGRQKEEIITQLRELAKLEPNLNDDVDADAERLSNMHPLVPDQCVHSRDLATGFERDIEANICPTYEVGDFRWHKNSSESANQVVPPNTTLGTYSEDVLDKHSISAVYNGGQTPNYLKCESLSTTPKVASYELTSQERDSAILRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAKIEH 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02906 384 SMART bboxneu5 15 62 IPR000315 GO:0008270
Bach1g02906 384 SMART bboxneu5 63 104 IPR000315 GO:0008270
Bach1g02906 384 ProSiteProfiles Zinc finger B-box type profile. 15 62 IPR000315 GO:0008270
Bach1g02906 384 ProSiteProfiles Zinc finger B-box type profile. 58 104 IPR000315 GO:0008270
Bach1g02906 384 ProSiteProfiles CCT domain profile. 340 382 IPR010402 GO:0005515
Bach1g02906 384 CDD Bbox1_BBX-like 19 62 - -
Bach1g02906 384 Pfam CCT motif 340 381 IPR010402 GO:0005515
Bach1g02906 384 CDD Bbox1_BBX-like 62 104 - -
Bach1g02906 384 Pfam B-box zinc finger 61 103 IPR000315 GO:0008270
Bach1g02906 384 Pfam B-box zinc finger 16 59 IPR000315 GO:0008270
Bach1g02906 384 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 19 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02906 Bach-Chr1 39324732 39326490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02906 15 355 C2C2-CO-like Transcription Factor Family AT2G47890 41.808 1.21e-77 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bach1g02906 CCT 1.4e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02906 - - pcin:129296118 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00467 8 2990119 2991757 Bach1g02906 1 39324732 39326490 BWGD
Bach1g02906 1 39324732 39326490 Bach1g02906 1 39324732 39326490 ECH