Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02893 ATGGAGGGTAAAGCCGCTGTTAACGACGGCTTTGTTCCTAATTCTGCTGAAAATGTCATTGGAATTCCAAGATGTAGCTACGGTGGTTTCCCCTCACACTTTAACCATGACCAAGGTGAGAAGGACGATTTGTACGATGAATTGTGGCGTGCATGCGCCGGCCCCTCTATTTATGTTCCGCGCGCCGGCGAAAAGGTTTTTTACTTCCCTCAAGGTCATTTGGAACAGGTTGCTGCATTTGCTGATCAGCGAGAGATTTGCATGGAAATGCCTGCATATGATTTGCCATCTAAGATCCCTTGTAGGGTAATCTGTGTTCAGCTCAAGGCGGAAGCTCACACAGATGAGGTTTTTGCACAAGTTACTTTGCTTCCAGAGCCAAAGTGTGATGATGAAGAATGTATGCCAGTTTTCTTCTATCTTAACCATGTAATTGTATGGGTTAAACAAATTGATTATTGCTTTGGATCTTTGCAGCAAAATGAACTTAGTTCAGAGGACAAAGACACTTGTCGGCTACCCTGCAGAGCTTCGTTCTGCTCCTTTAGCAAGACACTCACTCCATCAGACACAAGTACACATGGTGGATTCTCTATTCCTAAGAGACATGCTGATGAATGTTTCCCTCCTCTGGATATGTCTCAGCAATCACCATCACAAGAGCTAATTGCAAAGGACTTGCAAGGGTTTGAGTGGCGTTTTCGCCATATATTTCGTGGTCACCCAAGACGGCACTTGCTTACTAGTGGTTGGAGCACATTTTTGAATTCTAAGAGGCTTGTTGCAGGAGATGCATGCATTTTTCTGAGTGGGGAAAATGGAGAGCTTCGTGTTGGGATCCGTCGAGCAACGAAACAACAAAAGAGTGCATCGACCTCCGCCTCTGTGATATCTGGCCATAGTATGCAATTTGGAATATTGGCCAGTGCTTCCCATGCTGTTTCTACAGGATCCATGTTCACTGTATATTACCGTCCTTGGACAAATCCCTCTGAATTCATTGTTCCCCTGGATCAATACATGAAATCAAGTGAAGTGGACTACTCAGTTGGAACGAGAGTACAAATACATTATGGACCTGAAGAACGTAACAAAGGGAGATATGCTGGTACCGTTATTGGTGTTGAAGATATTGACAGTTCTAGATGGCCTGGTTCAGACTGGAGATGTCTCAAGGTGCAATGGGATGGCATACTAGACACATATGTGCATCCTGAAAGAGTTTCTCCTTGGAGCATTGAGCCTTTGGGATGTGCCAAGAAGAAACACATTTCTATTCTTCCCATACCAAAGAGGACACGTGTACTGGACCCTCTACTGCCCGGATGTGGTTTTGCCAAGGAGGACATAGTTCCAAATTTAGTCAAGCATGCAGCTAAGAGATCCGAAAAGGACTTACAATGCCAAGATTACAATGAAGAAGGTTCTTCACAGCATGCACAACCACCACCATCGTCAACAAATGCACTTCTCCCATCAAATGTCATCTCTAGTGATTCACAGTTGGAGATGGAGAGTCAGCTGCAGTTTGTAACGCAAAACCCTTTGCACCAATCTCTTGGCAGCACAATATCATTTCCAGATGATGACATATCAACTTCAAGCAACCCTAGTCGCCGCCCAATCTTCTGCACATATGGAACATGTAATAATGTCTCAATCAAGAGAGATATTTCAATCTCAAATGTGAACTCCAGTGATTCTGAATCCCAGGGGGGATGGCGCGCATCTGAATCTCGGGATGAGAATGAAGTTCTTTTTGGCCATCCTCATGGTTATAGTAGATACAAGCTATTCGGGTTCAACTTAATTGATAACCACCCGGAGCTCCCTTCACCACAACTTGCTGCTTTTAGCAAGACTTCAAGTCCGCCTTCTGTTACTCCAATGTCCCAGTCAAGTGTTTCTGCAACTATCCCTGTATCAGAACCATGCAAAAGTACTTCAGGTGTTACCTCGGAGGAACAAAACAAGAAATACTGCTCCGTTAATAGTAGGAGTTGCACAAAGGTGCTTAAGCATAGAACTGCTCTTGGAAGATCAATTGACCTCGCACGTTTTCCTGGATATGATGAGCTCATTTCTGAACTTGATTGCATGTTTGATTTTGGAGGAAGCTTGATTAACGGAAGCAGTGGATGGCAAGTGACCTACACAGATGACGATGGGGATATGATGCTGTTAGGAGATTACCCATGGCAATCCCAATCTCGTTCATACACACCTGGTAATGAACAACAAGACGAAGACCCCGAAACCCAAGTTGAAGATCTTAGGGTTCCTGAACATTGGTTATCACCTTCTAAGGCCTTGGAGGAATCAGAGTGGCTTAGGGTTACGCTGCACAGATGGTTGGATGGCGAATACTGTCCCGAGGAAACTAATGTGGAGATCAGCAAAGTTGCTGCTCAATCTTACTACAAATCTTTGCTAGAGAAACGAACAGACCTTGGTGAGATCTTGTTGAAAATGGCCTGGGAATTGGAGTCTATTTCTTATCAAGAGAGCTTTCATGGGGCATTTTCCTCAGCAAATGCAGCAATTAACCTCATTGCCCAACGTATAGACTTGAATGATCAACCAAGTGAATTTCATTGA 2598 0.4415 MEGKAAVNDGFVPNSAENVIGIPRCSYGGFPSHFNHDQGEKDDLYDELWRACAGPSIYVPRAGEKVFYFPQGHLEQVAAFADQREICMEMPAYDLPSKIPCRVICVQLKAEAHTDEVFAQVTLLPEPKCDDEECMPVFFYLNHVIVWVKQIDYCFGSLQQNELSSEDKDTCRLPCRASFCSFSKTLTPSDTSTHGGFSIPKRHADECFPPLDMSQQSPSQELIAKDLQGFEWRFRHIFRGHPRRHLLTSGWSTFLNSKRLVAGDACIFLSGENGELRVGIRRATKQQKSASTSASVISGHSMQFGILASASHAVSTGSMFTVYYRPWTNPSEFIVPLDQYMKSSEVDYSVGTRVQIHYGPEERNKGRYAGTVIGVEDIDSSRWPGSDWRCLKVQWDGILDTYVHPERVSPWSIEPLGCAKKKHISILPIPKRTRVLDPLLPGCGFAKEDIVPNLVKHAAKRSEKDLQCQDYNEEGSSQHAQPPPSSTNALLPSNVISSDSQLEMESQLQFVTQNPLHQSLGSTISFPDDDISTSSNPSRRPIFCTYGTCNNVSIKRDISISNVNSSDSESQGGWRASESRDENEVLFGHPHGYSRYKLFGFNLIDNHPELPSPQLAAFSKTSSPPSVTPMSQSSVSATIPVSEPCKSTSGVTSEEQNKKYCSVNSRSCTKVLKHRTALGRSIDLARFPGYDELISELDCMFDFGGSLINGSSGWQVTYTDDDGDMMLLGDYPWQSQSRSYTPGNEQQDEDPETQVEDLRVPEHWLSPSKALEESEWLRVTLHRWLDGEYCPEETNVEISKVAAQSYYKSLLEKRTDLGEILLKMAWELESISYQESFHGAFSSANAAINLIAQRIDLNDQPSEFH 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02893 865 Gene3D - 180 284 IPR015300 -
Bach1g02893 865 SUPERFAMILY DNA-binding pseudobarrel domain 178 312 IPR015300 -
Bach1g02893 865 ProSiteProfiles PB1 domain profile. 666 753 IPR000270 GO:0005515
Bach1g02893 865 MobiDBLite consensus disorder prediction 471 492 - -
Bach1g02893 865 FunFam Auxin response factor 347 420 - -
Bach1g02893 865 CDD B3_DNA 181 282 IPR003340 GO:0003677
Bach1g02893 865 Gene3D - 347 421 - -
Bach1g02893 865 Pfam AUX/IAA family 663 734 IPR033389 -
Bach1g02893 865 SMART B3_2 182 284 IPR003340 GO:0003677
Bach1g02893 865 Pfam B3 DNA binding domain 182 283 IPR003340 GO:0003677
Bach1g02893 865 SUPERFAMILY CAD & PB1 domains 667 741 - -
Bach1g02893 865 Gene3D - 661 741 - -
Bach1g02893 865 MobiDBLite consensus disorder prediction 562 581 - -
Bach1g02893 865 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 42 736 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bach1g02893 865 Pfam Auxin response factor 310 392 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bach1g02893 865 ProSiteProfiles B3 DNA-binding domain profile. 182 284 IPR003340 GO:0003677
Bach1g02893 865 FunFam Auxin response factor 180 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02893 Bach-Chr1 39246170 39253372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02893 664 734 B3 DNA Binding Superfamily AT5G62000 54.930 1.18e-19 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bach1g02893 AUX_IAA 2.7e-05 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02893 - - pcin:129286310 746.888