Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02873 ATGAGAGAGAAAGCGGATTCCCCTGTTGGAGTTCTAGAGGACTATTTTAAGAGCTCACCTTCAGAATCAGAAACAAGTTCTTCCAAAGAACCCATTGAAGATTCAGATGGTCAAGATAAGTCAAGAAACTGTCCTAGATGGCGTGGATTTCTTCAATTGTTCAGGACCAAATCAAAGAAACCCACATCCACATTGCATCCTCTCAGTGTTCTCAAGCTGTCAAAAAGATTCAGCTGTAGCATGAGGGAGATTATAATGCCAAATTATCGTTTAGATGCAGATTTGAACCAGCACTCATCTCCATGGAAGATCTTTACTCAGCATGAGATTGAAATTGCAACCAACAATTTCAGCCAAGAAAATTTGATTGGAAAGGGTGGATATGCTGAAGTCTACAGAGGGTGTTTGCCAAACGGTCAGCTTATAGCAGTTAAACGGCTAACAAGAGGAACCCCAGATGAAATCATAGGGGACTTCTTATCAGAACTTGGCATAATGGCACATGTAAACCATCCAAACACTGCCAAATTAGTGGGCTATGGAGTGGAGGGAGGGATGCATCTTGTTCTTAAATTGTCTGAGAAAGGGAGCTTAGCTTCTGTGCTATATGGTTTGAAAGAGAAACTACCATGGTGTGTTAGGCATAAAATTGCATTAGGAACAGCAAAAGGTATATTATATCTTCATGAGGGCTGTCAAAGGAGAATTATCCACAGAGATATCAAGGCTGCAAATATCTTGCTTACAGAGGAATATGAGCCTCAGATTTGTGATTTTGGGCTAGCAAAATGGCTACCAGAGAATTGGACTCACCACACCGTTTCAAAATTTGAAGGAACTTTTGGTTATCTTGCCCCTGAATATTTACTCCATGGCATAGTAGATGAGAAAACAGATGTGTTCGCCTTTGGTGTGCTGCTGTTAGAATTAGTCACTGGACGGCGAGCACTGGATTACTCACAGCAAAGCCTTGTTTTGTGGGCAAAACCATTGCTAAAGAAGAATGATATAAGGGAGCTTATTGATCCTTCTCTTGATAATGACTTTGACTCTCGGCAGATGAATCTTATGCTCTTGTCTGCTTCTTTATGCATACAACAGTACTCAATCCGTCGCCCATCTATGAGACAGGCATGA 1137 0.4125 MREKADSPVGVLEDYFKSSPSESETSSSKEPIEDSDGQDKSRNCPRWRGFLQLFRTKSKKPTSTLHPLSVLKLSKRFSCSMREIIMPNYRLDADLNQHSSPWKIFTQHEIEIATNNFSQENLIGKGGYAEVYRGCLPNGQLIAVKRLTRGTPDEIIGDFLSELGIMAHVNHPNTAKLVGYGVEGGMHLVLKLSEKGSLASVLYGLKEKLPWCVRHKIALGTAKGILYLHEGCQRRIIHRDIKAANILLTEEYEPQICDFGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVTGRRALDYSQQSLVLWAKPLLKKNDIRELIDPSLDNDFDSRQMNLMLLSASLCIQQYSIRRPSMRQA 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02873 378 ProSitePatterns Protein kinases ATP-binding region signature. 123 145 IPR017441 GO:0005524
Bach1g02873 378 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 88 191 - -
Bach1g02873 378 Gene3D Transferase(Phosphotransferase) domain 1 194 378 - -
Bach1g02873 378 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 194 378 - -
Bach1g02873 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Bach1g02873 378 SMART serkin_6 117 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g02873 378 SUPERFAMILY Protein kinase-like (PK-like) 97 378 IPR011009 -
Bach1g02873 378 MobiDBLite consensus disorder prediction 1 44 - -
Bach1g02873 378 Gene3D Phosphorylase Kinase; domain 1 88 191 - -
Bach1g02873 378 ProSiteProfiles Protein kinase domain profile. 117 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g02873 378 Pfam Protein kinase domain 118 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g02873 378 PANTHER OS08G0249100 PROTEIN 5 377 IPR046958 -
Bach1g02873 378 MobiDBLite consensus disorder prediction 27 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02873 Bach-Chr1 39120786 39122430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02873 104 377 Trihelix Transcription Factor Family AT1G68690 41.404 3.41e-66 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bach1g02873 Pkinase 9.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02873 - - gmx:100780587 619.772