Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02872 ATGTCCCTTCATTTTTACCTCTTCCTCTTTGCTCTCCTCACTTTCCCCCTCCCTTCCCTCTCCGCCAACGACACCCTTCTCAATGCTACTTGCCCTCTCAACTTCACCGTCCTTCTCGACCTCTACGGCGGTGCAAAGCCCTCGTTTGATTCCGGCAACGAGTGCCAGTTTCTCCGCCAAACCCTCCTTCTTGTTGAGTCCGATTATCTACGACGCACTGGCTTCTTCCTCTCACCTCTCAACTCTTCTGAGTCTTGCTGGGATGATTTCCAGTCTTTCGTCAATGGTTTCGAACCCAATTTTAATATTCGCTCTTCTTGTAACTTCACTACCAGTTGGATTTCTCAGGGCTGCATGAACATCACAACCCGAAATCAATTTGAAGCCTTGGTTCCCAATTCAACTCTTCAAGATGTGCAGGGGAATTGCAATCAATCCCTGGAAAACAACTCGCCCTGCTCCCTCTGTATTACGAGCTTGTCGAGCGTGCAAGCTTCCTACTTGAATGGTTCCTCGACTGGAAACATCTTCCCTTGTAGGGTTTATCCATATATTTATGCTGCTGCCTTCGTTAATCAGTATGGCCCCACCGATCCAGGTACTGCTAATTGCTTGTTCTCGATTCCATTTACGTCGGAGGATTCCAACGGTAAGAAACGAGAGATTGTTATTGCGACCGTTGTGATTGTTTGTGTATTGGGGTTGTCTCTGATAATTGGTGGGTTTTGGTATTATCGGAGACTGACCAAAAAGAAGAAGATGAGGAAGAGCAATATTAGTAGAACTGAGATGGCTTCTGGGTTGGATTCGATGAATGAAAGTACTACTTTGATTAGGTACACATTTGATGACATTAAGAAAGCAACTAGGAACTTCGCCAGCGATAATATTATTGGCAGAGGGGGGTATGGGAATGTGTATAAAGGGGTCTTACCTGATGGGAGTGAAGTTGCAATGAAAAGGTTCAAGAATTGTTCAGTTGCAGGCGATGCTAGTTTTACTCACGAAGTCCAGGTTATTGCAAGCGTTAGGCATGTCAACCTGGTTGCTTTGAGAGGTTATTGTACTGCTACAACTAATTTTGAAGGTAGAGTTTTAGATGTCATCGAAGATGGTATGCCAGAACCGGCTTCACCTGAAGTTCTTGAGAAGTATGTGTTGATTGCTGTTCTTTGTTCTCATCCACAGCTATATGCTAGGCCAACAATGGATCAGGTTGTGAAAATGATGGAGACAGAGACATCAATTCTTTCAATACCAGAACGGCCAATTCCTCTTGTTGCTGAGAGGATTGATATTGAAAGATCAGCCAGCAATTGTGGCTCGGGCAACCTCTCTAGTCCAACAGGTTATCAAGCATATACATACGGAAATGAACTGCATTCTTCCAGTTCTAAAGAAGAAGGAAGTACTGGTTCCAGAGTAGTAAGTACTAGTACAGATTGA 1446 0.4433 MSLHFYLFLFALLTFPLPSLSANDTLLNATCPLNFTVLLDLYGGAKPSFDSGNECQFLRQTLLLVESDYLRRTGFFLSPLNSSESCWDDFQSFVNGFEPNFNIRSSCNFTTSWISQGCMNITTRNQFEALVPNSTLQDVQGNCNQSLENNSPCSLCITSLSSVQASYLNGSSTGNIFPCRVYPYIYAAAFVNQYGPTDPGTANCLFSIPFTSEDSNGKKREIVIATVVIVCVLGLSLIIGGFWYYRRLTKKKKMRKSNISRTEMASGLDSMNESTTLIRYTFDDIKKATRNFASDNIIGRGGYGNVYKGVLPDGSEVAMKRFKNCSVAGDASFTHEVQVIASVRHVNLVALRGYCTATTNFEGRVLDVIEDGMPEPASPEVLEKYVLIAVLCSHPQLYARPTMDQVVKMMETETSILSIPERPIPLVAERIDIERSASNCGSGNLSSPTGYQAYTYGNELHSSSSKEEGSTGSRVVSTSTD 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02872 481 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 362 467 - -
Bach1g02872 481 Pfam SPARK 28 171 IPR043891 -
Bach1g02872 481 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 253 371 - -
Bach1g02872 481 MobiDBLite consensus disorder prediction 438 481 - -
Bach1g02872 481 Pfam Protein kinase domain 294 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g02872 481 SUPERFAMILY Protein kinase-like (PK-like) 268 359 IPR011009 -
Bach1g02872 481 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Bach1g02872 481 Gene3D Phosphorylase Kinase; domain 1 249 361 - -
Bach1g02872 481 ProSiteProfiles Protein kinase domain profile. 292 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02872 Bach-Chr1 39113861 39115774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02872 362 459 Receptor kinase-like Gene Family AT2G48010 68.000 7.15e-35 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Bach1g02872 SPARK 5.8e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02872 - - gmx:100819453 439.113