Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02862 ATGGAGTCTCCACCCTTCTCTCTCAACACTAAACCCTTGCGTCTCCAAGAGCTAAAACCCCATTGGAGTAGTCTCCGCCTCTCGGTGCTCACTGCTCAACTTGTTCCACCTCGAGGTTCTAGGGCTGTTTCTTCTTCTGTCGTACTAGTACTCTTAGCTCCAATGGCTTCTGTTGCTTTCAGAAATTCTAGTTCCAAGCGATTCCTACCATTTTCTTCCCAAATCTATTCGTGCTGCCGAGGCTCAGTTTCCACACATTCCACTGTCTCCGAGCTGGTTAATGGAAATGAGAAAATCTCTTCTTCAAATCCATGGTGGAGATCCATGGCTACTTTTACACGAACAAAACCCCATGTTAATGTGGGTACTATTGGACATGTCGATCACGGGAAGACTACACTAACTGCAGCAATCACAAAGGTGCTAGCGGAAGAAGGGAAAGCTAAGGCTGTTGCCTTTGATGAAATTGATAAAGCTCCTGAGGAGAAAAAGAGAGGAATTACCATTGCTACGGCCCATGTTGAGTATGAGACAGCTAAACGACACTATGCTCATGTAGACTGCCCTGGACATGCGGACTATGTTAAGAATATGATTACTGGAGCTGCCCAAATGGATGGTGGTATTCTTGTGGTGTCTGCCCCTGATGGACCAATGCCACAGACCAAGGAACACATTCTTCTTGCACGCCAAGTTGGTGTGCCGTCCCTTGTTTGCTTTTTAAATAAAGTTGATGCTGTTGATGATGCAGAGTTGTTAGAGCTTGTAGAAATGGAGCTTCGTGAACTACTAAACTTCTACAAGTTTCCTGGAGATGACATCCCTATTATCAGAGGTTCGGCTTTGTCCGCTTTACAGGGTACAAATGACGAAATTGGTAGAAAGGCTATTCTAAAATTAATGGACGCAGTAGATGAATACATTCCTGACCCGGTTCGCCAACTGGACAAGCCTTTCCTAATGCCAATTGAAGATGTATTCTCAATTCAGGGTCGTGGAACAGTAGCCACTGGTCGTGCTGAACAGGGGGTTATCAAGGTCGGTGATGAAGTTGAGGTTTTGGGCTTAATGCAGGGTGGTCCTCTCAAAACTACTGTAACTGGAGTTGAGATGTTCAAGAAGATATTGGATCAAGGACAGGCTGGTGACAATGTCGGTCTTCTTCTACGTGGTCTAAAAAGGGAAGATATTCAACGTGGTCAGGTCATTGCAAAGCCTGGTTCTTTGAAAACATACAAGAGATTTGAGGCAGAAATATATGTACTCACAAAGGATGAAGGGGGGCGACACACTGCCTTCTTCTCAAACTATAGACCTCAGTTTTACATGAGAACTGCTGATATCACTGGAAAAGTAGAATTGCCAGAAAATGTTAAAATGGTTATGCCCGGAGACAATGTTACTGCAGTTTTTGAACTTATTTCAGCTGTTCCACTTGAAGCAGGACAAAGATTTGCCTTGAGAGAAGGGGGCAGAACCGTCGGTGCAGGGGTTGTGTCAAAAGTACTGAGCTAA 1515 0.4469 MESPPFSLNTKPLRLQELKPHWSSLRLSVLTAQLVPPRGSRAVSSSVVLVLLAPMASVAFRNSSSKRFLPFSSQIYSCCRGSVSTHSTVSELVNGNEKISSSNPWWRSMATFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAVAFDEIDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGVPSLVCFLNKVDAVDDAELLELVEMELRELLNFYKFPGDDIPIIRGSALSALQGTNDEIGRKAILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRAEQGVIKVGDEVEVLGLMQGGPLKTTVTGVEMFKKILDQGQAGDNVGLLLRGLKREDIQRGQVIAKPGSLKTYKRFEAEIYVLTKDEGGRHTAFFSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAVFELISAVPLEAGQRFALREGGRTVGAGVVSKVLS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02862 504 CDD EFTU_III 410 499 - -
Bach1g02862 504 CDD EFTU_II 319 407 IPR033720 -
Bach1g02862 504 PANTHER ELONGATION FACTOR TU-RELATED 110 503 - -
Bach1g02862 504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 334 IPR027417 -
Bach1g02862 504 FunFam Elongation factor Tu 314 444 - -
Bach1g02862 504 Pfam Elongation factor Tu domain 2 333 403 IPR004161 GO:0005525
Bach1g02862 504 NCBIfam small GTP-binding protein domain 119 256 IPR005225 GO:0005525
Bach1g02862 504 Gene3D - 108 311 IPR027417 -
Bach1g02862 504 NCBIfam elongation factor Tu 108 503 IPR004541 GO:0003746|GO:0005525|GO:0006414
Bach1g02862 504 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 157 172 IPR031157 -
Bach1g02862 504 FunFam Elongation factor Tu 107 311 - -
Bach1g02862 504 PRINTS GTP-binding elongation factor signature 200 211 IPR000795 GO:0003924|GO:0005525
Bach1g02862 504 PRINTS GTP-binding elongation factor signature 120 133 IPR000795 GO:0003924|GO:0005525
Bach1g02862 504 PRINTS GTP-binding elongation factor signature 164 172 IPR000795 GO:0003924|GO:0005525
Bach1g02862 504 PRINTS GTP-binding elongation factor signature 237 246 IPR000795 GO:0003924|GO:0005525
Bach1g02862 504 PRINTS GTP-binding elongation factor signature 184 194 IPR000795 GO:0003924|GO:0005525
Bach1g02862 504 Gene3D Translation factors 314 444 - -
Bach1g02862 504 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 116 312 IPR000795 GO:0003924|GO:0005525
Bach1g02862 504 Gene3D Translation factors 448 503 - -
Bach1g02862 504 Pfam Elongation factor Tu C-terminal domain 409 502 IPR004160 -
Bach1g02862 504 SUPERFAMILY Translation proteins 313 409 IPR009000 -
Bach1g02862 504 Pfam Elongation factor Tu GTP binding domain 116 309 IPR000795 GO:0003924|GO:0005525
Bach1g02862 504 CDD EF_Tu 117 311 IPR041709 -
Bach1g02862 504 Hamap Elongation factor Tu [tuf]. 107 504 IPR004541 GO:0003746|GO:0005525|GO:0006414
Bach1g02862 504 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 413 503 IPR009001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02862 Bach-Chr1 39028893 39033085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02862 114 502 Eukaryotic Initiation Factors Gene Family AT5G60390 30.752 2.38e-44 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02862 K02358 - qsa:O6P43_007076 806.979