Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02848 ATGCCCGAGAATAGTAAAGCGGCAGGCAGAGGTTTCAAAAGAAAGTACCCGCACGATGATCAACGGCAAGAACAAGGATCTTATAATATGAATTCTAGGCCTTATGATAGAAACGCACCTCCTCCTGGCTGGTTAGATTGCCCTGCATATGGTCAAGAAATAGGATGGATAATCCCTTCAAAGGTTCCGCTTGGTGAATCCTTCAATGATTATATTCCAAGTGAAAAAAGATATTCTCCCAAGCAGGCAATTCTTCAACAAAGACGTTTAGGTAGAGAACTCGGTTTAGTGATTGATCTGACAAATACTACTCGTTACTACCGAGTATCAGATTGGACAGAAGAGGGGATTGGCCATGTCAAGATAAGATGCCAAGGAAAAGAATCTGTACCTGATGATGAATCTGTAAACAAATTTTGCAATGCGGTTCAGGAATTTTTCTCTCGAAGAGAAAACACCAATAAACATGTACTTGTCCACTGCACACATGGACATAACCGCACAGGTTATATGGTTGTTCACTTTCTTGCGCGCACAGAATCAATTTCTGTAACTGAAGCAATAAATAAATTCGCTTGGGCACGTCACCCCGGAATTTACAAGCAGGATTACATTGATGCGCTATACATGTGTTTTCATGAAAGGAAGCCTGAAGAAGTTGTTTGTCCTCCAACTCCAGAATGGAAGGGACTCTCTGATCCTGATTTTCATGGTGAAGCTGCTGTCCCATCTGTAGAAAATCATGGAGTTGTTCCTTCTGTGGATAATATTGTGAGGAATGAAGTAATGACAAATGATGATGTTTTGGGAGATCCTGTACCTTCAAATCAGCTGCATACGATGCGACAAGTCTGTTATCAACTGCTTAAGCTGGGCTCAGGGGGAAGAGCATGCTCACAGTTTCCGGGTTCACATCCTGTTTCTCTCAATAGGGACAATCTGCAACTGTTAAGACAACGGTATTACTATGCCACTTGGAAAGCTGACGGGACACGATACATGATGCTGATTACTTGCGATGGATGTTATTTAATTGACAGAAAATTTCATTTCAGAAGGATCCATATGCGGTTTCCTTGCAGATACTCAAATGGGGGTAATCCCGAGAGAAATCACCACTACACATTACTTGATGGGGAGATGATAATTGACACGGATCCTCATACACAGAAGCAGGAAAGAAGATACCTTATATATGATCTGATGGCTATTAATGAAGGCTCTGTGACTGAGCTGCCATTCTATGAACGGTGGAAATTGCTGGAAAAAGAAGTGATTGAACCTCGTAACATGGAACGTGAGGCTCTTTCCAAGAGTATAGATCCTTACTACAGATACGACTTGGAGCCATTTAGTGTGAGGAGGAAGGGCTTTTGGTTACTCTCTACTGTTTCAAAGCTCCTCAACAAATTCATCCCACAACTTTCGCATCCATCTGATGGTCTTGTATTCCAGGGTTGGGATGATCCTTATGTCCCTCGAACGCATGAAGGTCTTCTGAAGTGGAAATACCCTGAAATGAACTCAGTTGATTTCCTCTTTGAGTTGGGAGCTGGTGGTCGTCCCCTCCTTTTTCTGCATGAACGTGGAAAGAAGAAGTTGATGGAAAGGAACCGGGTTGTTTTTAAAGATGCATCAGACACCTCTTCTTATTCTGGGATGATCATTGAGTGCTCCTGGGATTCTGAGAGGAATCATTGGGTCTGCATGCGGACTAGGACCGACAAATCAACTCCAAATGAGTTCAACACCTATAGAAAGGTCATGCGAAGCATAAAGGATAACATTACAGAAGATGTTTTGATGAAGGAGATCGATGAGATCATTCGCTTACCCTTGTATGCCGACAGAATACAAAGAGATATCAAGGCCCACCAGCATATGGTCTCTGCGAGGCGCAAGTGA 1905 0.4273 MPENSKAAGRGFKRKYPHDDQRQEQGSYNMNSRPYDRNAPPPGWLDCPAYGQEIGWIIPSKVPLGESFNDYIPSEKRYSPKQAILQQRRLGRELGLVIDLTNTTRYYRVSDWTEEGIGHVKIRCQGKESVPDDESVNKFCNAVQEFFSRRENTNKHVLVHCTHGHNRTGYMVVHFLARTESISVTEAINKFAWARHPGIYKQDYIDALYMCFHERKPEEVVCPPTPEWKGLSDPDFHGEAAVPSVENHGVVPSVDNIVRNEVMTNDDVLGDPVPSNQLHTMRQVCYQLLKLGSGGRACSQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITCDGCYLIDRKFHFRRIHMRFPCRYSNGGNPERNHHYTLLDGEMIIDTDPHTQKQERRYLIYDLMAINEGSVTELPFYERWKLLEKEVIEPRNMEREALSKSIDPYYRYDLEPFSVRRKGFWLLSTVSKLLNKFIPQLSHPSDGLVFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLFELGAGGRPLLFLHERGKKKLMERNRVVFKDASDTSSYSGMIIECSWDSERNHWVCMRTRTDKSTPNEFNTYRKVMRSIKDNITEDVLMKEIDEIIRLPLYADRIQRDIKAHQHMVSARRK 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02848 634 Pfam mRNA capping enzyme, C-terminal domain 508 602 IPR013846 -
Bach1g02848 634 FunFam mRNA capping enzyme family protein 36 249 - -
Bach1g02848 634 Gene3D - 502 611 IPR012340 -
Bach1g02848 634 Pfam Dual specificity phosphatase, catalytic domain 93 208 IPR000340 GO:0008138|GO:0016311
Bach1g02848 634 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 41 228 IPR029021 -
Bach1g02848 634 CDD RNA_5'-triphosphatase 43 210 - -
Bach1g02848 634 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 137 206 IPR000387 GO:0016311|GO:0016791
Bach1g02848 634 FunFam mRNA capping enzyme family protein 502 611 - -
Bach1g02848 634 PANTHER MRNA-CAPPING ENZYME 35 616 - -
Bach1g02848 634 Pfam mRNA capping enzyme, catalytic domain 305 503 IPR001339 GO:0004484|GO:0005524|GO:0006370
Bach1g02848 634 MobiDBLite consensus disorder prediction 8 22 - -
Bach1g02848 634 Gene3D Protein tyrosine phosphatase superfamily 14 235 IPR029021 -
Bach1g02848 634 SUPERFAMILY Nucleic acid-binding proteins 506 619 IPR012340 -
Bach1g02848 634 ProSitePatterns Tyrosine specific protein phosphatases active site. 159 169 IPR016130 GO:0016311|GO:0016791
Bach1g02848 634 CDD Adenylation_mRNA_capping 276 504 IPR001339 GO:0004484|GO:0005524|GO:0006370
Bach1g02848 634 PIRSF mRNA_capping_HCE 27 634 IPR017074 GO:0004484|GO:0006370|GO:0140818
Bach1g02848 634 FunFam mRNA capping enzyme, putative 264 501 - -
Bach1g02848 634 Gene3D DNA ligase/mRNA capping enzyme 255 501 - -
Bach1g02848 634 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 267 504 - -
Bach1g02848 634 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02848 Bach-Chr1 38898838 38905165 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02848 23 624 Protein tyrosine phosphatase (PTP) family AT3G09100 62.500 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02848 K13917 - gmx:100778292 1057.74