Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02843 ATGGCTGCACCGCCAAGTAGCAGGCTCCAAAGCATGTTGCAGGCTGCGGTGCAATCCGTTCAATGGACTTATAGCCTCTTCTGGCAACTTTGTCCCCAACAAGGGATTCTAGTGTGGGCTGATGGGTACTACAATGGGGCAATTAAGACAAGGAAGACAGTGCAACCAATGGAGGTTAGTGCCGAGGAAGCGTCTCTCCAAAGAAGCCAGCAACTTAGGGAGCTTTATGACTCATTGTCTGCCGGAGAGACAAACCCGCCGACACGCCGGCCTTGCGCCTCCTTGTCTCCGGAGGACCTAACTGAGTCTGAATGGTTCTACTTGATGTGTGTCTCATTCTCCTTTCCTCCTGGTGTCGGGTTACCGGGAAGGGCGTATGCAAGGAGGCAGCATGTATGGTTGGCTGGTGCAAATGAGGTGGACAGCAAAGCTTTTTCAAGAGCTATTCTTGCCAAGAGTGCTCGTATACAGACCGTTGTATGCATTCCTCTATTGGACGGCGTCGTAGAACTCGGCTCAACCGATAAGATTCAAGAAGACGTTAATTTTATCCAGCATATCAAGAGCTTCTTCGCAGACCACCACCAACATCAACAGCACCACCCTCCGCCGCCGAAGCCCGCTCTCTCGGAGCACTCCACCTCCAATCCCACTTCCTCCTCAGACCACTCTCGCTTCCACTCACCTCCAATTCCAGCCACCATGTATCACACCGTGGCTCAGCCATCACCACCAGCAGCAAGTCCCACAGCAATTAATCAAAACCAAGACGACATGGAAGAAGGTGACGAGGAGGAGGAAGAAGAAGAAGAAGCTGACTCTGACTCCGAAGCAGAGACAGCTGTTCGTAACAGCCGTCCGGCATCAACTGACATGGTAGCAGCCGCCGCGGAGCCCAGCGAGCTAATGCAGCTAGAAATGTCTGAGTCTATCCGGGTCGGGTCCCCCGATGATGGGTCGAACAACCTGGACTCAGATTTCCATATGTTAGCGGTGGGCCAGAGTCAGAGTCAGTCATTGGATCATCAGCGGCGAGCTGACTCGTACAGAGCCGAGTCAACCCGGAGATGGACGTCGGTGCAACTGCAAGACCCAGTGCCACTCCTTTCCTCAGGGCTTCAAGTGGGACCTCCATTAGACGACCTCACAAAAGAGGACACTCACTATTCTCAAACGGTTTCCACCATCCTCCAAAGCCAGTCCGCACGGTGGGCTGAATCACCCACCATGGGCTACAACATCTACTCCTCTCAATCAGCTTTCGCCAAGTGGAACAGCCACGCTGACCACACTCTCCACGTGGCAGTCGATGGCACTTCCCAGTGGCTCCTCAAGTACATTTTGTTCAGCGTCCCATTCCTACACACCAAGTACCGCGACGAGAACTCGCCGAGATCCGGCGACGCCGCTGCCCGGTTGCGGGGTAAGGGAACGCCGCAAGATGAGCTCAGCGCCAACCATGTGCTTGCTGAGCGCCGCCGCCGTGAGAAGCTCAATGAGAGGTTCATCATTCTCAGGTCGCTAGTGCCCTTCGTCACCAAGATGGACAAGGCCTCCATATTAGGGGACACCATCGAGTACGTGAAACAGTTGCGGAAAAAGATTCAAGATCTCGAGGCACGAAACCGCCAGATGGAGAATGATCAACGGTCCAGATCGATTGACCTGCAACGGACGACTAGTTCAAAAGAACAACAGAGGAGCGGGGTCACAGTAATGGATCAGGCACGGATCGGTGCAACCGGGTCACATAGGAAGAAGTTGAGGATCACGGAAGGGGTGACGAAGTCTAAGACGGTGGATGCATCACCGCCGTCTTCGCCGTTGGCTTCGGAGGTGGTAGCATCGGTGCAGGTGTCAATCATAGAGAGTGACGCATTGTTGGAGTTGGAGTGCCCGCATAGGGAAGGGTTGTTACTGGACGTGATGCAAGTGCTGAGGGAGATGAGGATAGAGGTGACGGCGGTTCAATCGTCGTTGAACAATGGGGTGTTTGTGGCAGAGTTGAGGGCTAAGGTGAAGGAACATGGAAATGTAAATGGAGGCAAGAAGGTGAGCATTGTAGAAGTGAAGAGGGCCCTAAATCAAGTTATACCCCATGCCGATTAGTAAGAATACTAATATTAGGTTTGTAAGGATGCTGGGC 2146 0.5336 MAAPPSSRLQSMLQAAVQSVQWTYSLFWQLCPQQGILVWADGYYNGAIKTRKTVQPMEVSAEEASLQRSQQLRELYDSLSAGETNPPTRRPCASLSPEDLTESEWFYLMCVSFSFPPGVGLPGRAYARRQHVWLAGANEVDSKAFSRAILAKSARIQTVVCIPLLDGVVELGSTDKIQEDVNFIQHIKSFFADHHQHQQHHPPPPKPALSEHSTSNPTSSSDHSRFHSPPIPATMYHTVAQPSPPAASPTAINQNQDDMEEGDEEEEEEEEADSDSEAETAVRNSRPASTDMVAAAAEPSELMQLEMSESIRVGSPDDGSNNLDSDFHMLAVGQSQSQSLDHQRRADSYRAESTRRWTSVQLQDPVPLLSSGLQVGPPLDDLTKEDTHYSQTVSTILQSQSARWAESPTMGYNIYSSQSAFAKWNSHADHTLHVAVDGTSQWLLKYILFSVPFLHTKYRDENSPRSGDAAARLRGKGTPQDELSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLEARNRQMENDQRSRSIDLQRTTSSKEQQRSGVTVMDQARIGATGSHRKKLRITEGVTKSKTVDASPPSSPLASEVVASVQVSIIESDALLELECPHREGLLLDVMQVLREMRIEVTAVQSSLNNGVFVAELRAKVKEHGNVNGGKKVSIVEVKRALNQVIPHAD 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02843 702 MobiDBLite consensus disorder prediction 460 482 - -
Bach1g02843 702 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 482 531 IPR011598 GO:0046983
Bach1g02843 702 MobiDBLite consensus disorder prediction 193 293 - -
Bach1g02843 702 MobiDBLite consensus disorder prediction 539 553 - -
Bach1g02843 702 Pfam Helix-loop-helix DNA-binding domain 485 532 IPR011598 GO:0046983
Bach1g02843 702 Gene3D - 483 555 IPR036638 GO:0046983
Bach1g02843 702 Coils Coil 521 548 - -
Bach1g02843 702 MobiDBLite consensus disorder prediction 257 276 - -
Bach1g02843 702 Coils Coil 252 272 - -
Bach1g02843 702 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 484 549 IPR036638 GO:0046983
Bach1g02843 702 MobiDBLite consensus disorder prediction 554 571 - -
Bach1g02843 702 MobiDBLite consensus disorder prediction 241 256 - -
Bach1g02843 702 MobiDBLite consensus disorder prediction 211 227 - -
Bach1g02843 702 SMART finulus 488 537 IPR011598 GO:0046983
Bach1g02843 702 MobiDBLite consensus disorder prediction 539 571 - -
Bach1g02843 702 PANTHER TRANSCRIPTION FACTOR TT8 3 699 - -
Bach1g02843 702 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 191 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02843 Bach-Chr1 38866656 38871977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02843 312 700 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 36.548 5.21e-56 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach1g02843 bHLH-MYC_N 3e-53 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02843 - - pvy:116122009 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00525 8 3377907 3382361 Bach1g02843 1 38866656 38871977 BWGD