Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02833 ATGGATCAGAAGGAGTCTCACATCACCGCTGCGAGACGAAGCTTGAAGCGAAAGCTCGAACAAGAATTCAACAAAGACCAAGGAGATCAAGTAGAATCTGATCGCAAGGTGCTAATTCTCGAACCTGAACAACCTTATCAGGAGATTCTCAGCGATGTTCGAGCTCAGGTGGCGGTCCTCAACTCCACTTTCTCATCTTCCGAATCAGATCGTGCAGCAGCCAAACGTGCCGTTCATGTCATTTCTGAATTTGCAAAGAATGAGGAGTTTGTGTATGCTATAGTGAACTGTGGAGCCGTTCCGGCTTTGGTGAGACATCTACAAGCGCCCGAGCAAGTGAGGCAAGGTGATGGTGCTCCCATGCCTTACGAGCATGAGGTGGAGAAAGGGTGTGCTTTCGCCCTTGGGCTCCTTTCCATTAAACCAGAGTATCAAGAACTCATTGTTGATGCTGGAGCCCTGGCTTATCTTGTAGATTTGTTACGGAGGCACAAGACCAGTAGCAATTCTCGACAACTTTCTGGTGTTGTTAGGAGAGCAGCTGATGCAATAACCAACCTTGCACATGAAAATAGTATCACTAAAACCCGAGTCAGGATGGAATCTGGAATCCCTCCGCTTGTTGAATTGCTTGAATTCCCTGACACGAAGGTACAGAGAGCAGCCGCAGGGGCGTTACGAACTCTTGCTTTTAAAAATGATGAAAATAAAAACCAGATTGTTGAATGCAACGCATTACCGACTCTTGTACTAATGCTTAGATCAGAGGATGTTGCAATACATTATGAAGCGGTTGGTGTGATTGGAAACCTTGTCCACTCCTCGCCAAATATTAAGAAAGAAGTTCTTCTAGCTGGGGCTCTACAACCCGTAATTGGCTTACTTAGTTCTTGCTGTTCGGAAAGTCAAAGAGAAGCTGCTCTTTTACTTGGTCAATTTGCAGCAACAGATTCGAATTGCAAGGTTCACATCGCCCAAAGAGGTGCTCTCCAGCCTTTAATTGACATGCTAAATTCTCCTGATGCACAGCTTCAGGAAATGTCAGCTTTTGCACTTGGGAGGTTGGCACAGGACACACATAACCAAGCTGGTATTGCACATAATGGAGGCATCGAGCCTCTCCTCAATCTTCTTGGCTCGAAGAATGGACCTCTCCAACATAATGCAGCCTTTGCTCTATATGGTCTTGCTGATAATGAGGATAATGTTGCAGATATTATTAAATTTGGCGGTGTTCAAAAACTACAACATGGAGATTTCAAAGTTCAACCTACTAAGGAGTGTGTCGCAAAGACTTTGAAAAGATTGGAGGAGAAGATGCATGGGCGAGTGCTGAAACAATTGATATATCTTATGCGGTTCTCAGAAAAGGCTCTTCAGAAACGCGTATCTCTTGCTCTTGCTCATTTATGTGCCCCTGATGATCGCAAGGCTATTTTCATTGACAACAATGGGCTGGAGTTGCTGCTGGATCTTCTGGAGTCTAAAAGCCTCAAGCAGAGACGCGAGAGTTCAGTGGCACTGTATAAGTTGGCTACTAAAGCCACATCTGTCTCTCCTGTTGATGCTGCCCCTCCATCACCAATTCCCCAGGTAGTATACTTAGGTGAGCAGTATGTAAACAATCCTACACTCTCTGATGTCACATTCTTAGTAGAAGGCAAACGGTTTTATGCTCACAGAATTTGTTTGCTTGCATCTTCTGATATATTCCGTGCAATGTTCGATGGTGGTTACAGGGAAAGGGAAGCCAAAGATATAGAAATTCCGAATATTAAATGGGATGTCTTTGAGTTGATGATGAGATTCATTTACACGGGAACAGTAGATGTCAATTTAGATATTGCTCCGGATCTCCTTAGAGCTGCTGATCAGTATCTTCTTGACGGCCTTAAGCGTCTCTGTGAATATACTATTGCTCAGGATATTTCTGCGGGAAATGTTCAACTAATGTACGAGCTATCAGAGGCTTTCAATGCAACGTCATTAAGGCAAGCGTGCATACTGTTTGTATTGGAGCAATTTGACAAATTGAGTCCTAAACCATGGTACAGCCGCCTAATTCGTCGCATCATACCAGATATACGCCATTTTTTTACGAGTTTACTTACGAAGCCTAATCCAGCTGACTCGTCAGGTCCCTAG 2145 0.4424 MDQKESHITAARRSLKRKLEQEFNKDQGDQVESDRKVLILEPEQPYQEILSDVRAQVAVLNSTFSSSESDRAAAKRAVHVISEFAKNEEFVYAIVNCGAVPALVRHLQAPEQVRQGDGAPMPYEHEVEKGCAFALGLLSIKPEYQELIVDAGALAYLVDLLRRHKTSSNSRQLSGVVRRAADAITNLAHENSITKTRVRMESGIPPLVELLEFPDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLVLMLRSEDVAIHYEAVGVIGNLVHSSPNIKKEVLLAGALQPVIGLLSSCCSESQREAALLLGQFAATDSNCKVHIAQRGALQPLIDMLNSPDAQLQEMSAFALGRLAQDTHNQAGIAHNGGIEPLLNLLGSKNGPLQHNAAFALYGLADNEDNVADIIKFGGVQKLQHGDFKVQPTKECVAKTLKRLEEKMHGRVLKQLIYLMRFSEKALQKRVSLALAHLCAPDDRKAIFIDNNGLELLLDLLESKSLKQRRESSVALYKLATKATSVSPVDAAPPSPIPQVVYLGEQYVNNPTLSDVTFLVEGKRFYAHRICLLASSDIFRAMFDGGYREREAKDIEIPNIKWDVFELMMRFIYTGTVDVNLDIAPDLLRAADQYLLDGLKRLCEYTIAQDISAGNVQLMYELSEAFNATSLRQACILFVLEQFDKLSPKPWYSRLIRRIIPDIRHFFTSLLTKPNPADSSGP 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02833 714 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 369 411 IPR000225 GO:0005515
Bach1g02833 714 Pfam Armadillo/beta-catenin-like repeat 201 230 IPR000225 GO:0005515
Bach1g02833 714 Pfam Armadillo/beta-catenin-like repeat 233 272 IPR000225 GO:0005515
Bach1g02833 714 Pfam Armadillo/beta-catenin-like repeat 318 356 IPR000225 GO:0005515
Bach1g02833 714 Gene3D - 3 356 IPR011989 -
Bach1g02833 714 SMART arm_5 87 140 IPR000225 GO:0005515
Bach1g02833 714 SMART arm_5 233 273 IPR000225 GO:0005515
Bach1g02833 714 SMART arm_5 141 189 IPR000225 GO:0005515
Bach1g02833 714 SMART arm_5 191 231 IPR000225 GO:0005515
Bach1g02833 714 SMART arm_5 473 513 IPR000225 GO:0005515
Bach1g02833 714 SMART arm_5 275 315 IPR000225 GO:0005515
Bach1g02833 714 SMART arm_5 317 357 IPR000225 GO:0005515
Bach1g02833 714 SMART arm_5 358 398 IPR000225 GO:0005515
Bach1g02833 714 SMART BTB_4 546 643 IPR000210 GO:0005515
Bach1g02833 714 SUPERFAMILY POZ domain 531 640 IPR011333 -
Bach1g02833 714 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 98 153 IPR000225 GO:0005515
Bach1g02833 714 SUPERFAMILY ARM repeat 444 513 IPR016024 -
Bach1g02833 714 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 328 370 IPR000225 GO:0005515
Bach1g02833 714 Gene3D - 441 521 IPR011989 -
Bach1g02833 714 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 244 286 IPR000225 GO:0005515
Bach1g02833 714 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 5 707 IPR044282 -
Bach1g02833 714 Pfam BTB/POZ domain 539 641 IPR000210 GO:0005515
Bach1g02833 714 SUPERFAMILY ARM repeat 57 416 IPR016024 -
Bach1g02833 714 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 202 237 IPR000225 GO:0005515
Bach1g02833 714 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 152 192 IPR000225 GO:0005515
Bach1g02833 714 Gene3D Potassium Channel Kv1.1; Chain A 537 680 IPR011333 -
Bach1g02833 714 ProSiteProfiles BTB domain profile. 546 613 IPR000210 GO:0005515
Bach1g02833 714 Gene3D - 357 440 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02833 Bach-Chr1 38787698 38792933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02833 295 515 U-box Gene Family AT2G23140 27.391 2.02e-11 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bach1g02833 BTB 1.8e-26 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02833 - - csin:114287792 1061.21