Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02792 ATGGATTATCTAGTGCAAGAAGAGTACTTGGAAGCTTTTTCATCCCAGTTGGGAGGTCGCCCAGAAATGATTCCTCCGCCGCAGCCCATAGAGGGGCTTCACGATATAGGACCACCGCCATTCCTCACCAAGACCTTTGATGTGGTGGACGACCCAACAACCAATCACATAGTTTCGTGGAGCAGAGCTGGTACTAGCTTCGTGGTTTGGGATCCACATGCTTTCTCTACGAATATCCTTCCCAGACACTTCAAGCACAACAATTTCTCAAGCTTTGTGAGGCAATCAAATACTTATGGTTTTCGGAAAATTGATCCAGATAAGTGGGAATTTGCTAATGAGGGATTCATGAGAGGGCACAGGCATCTTTTGAAGAACATAAGGAGAAGGAAAGCACCTTCTCAGCCTGGTTTTTCCCAAGAAGCACAAGGCTGTGTTGAAGTAGGCCAATTTGGACTTGACGAAGAAGTTGATCGCTTGAGGCATGACAAGCAGGTGCTAATGATGGAACTTGTGAAGCTTACACAGCAGCAGCAAAACACCAGAGCTTACCTTCAGGCAATGGAGCAAAGACTGCAAGGAACTGAGGTTAAGCAGCAACAAACGATGGCTTTCTTAGCCAGGGCTATGAAAAATCCAGCCTTTCTTCAGCAGCTAGTTCAGAACAAAGAGAAGAGAAAGGAGCTTGAAGAAGCCATGACCAAAAAGAGGAGAAGGCCAATTGAGCAAGGACCCAGCGGTGTTGGTGCATCAAGCAGTAGTGGGGCAGAAAAGGACCCTGTCAAAGCTGAACCACTTGAGTTTGAAGACTATGGGTTTCAAGTATCAGAACTGGAGGTTCTAGCTATGGAAATGCAGGGTTATGGTAGGGGGAGAAGAGAAATGAAGGAGGCACTAGAACCATCGGAGAAGCTGGACAAAGAACTAGATGAAGGGTTCTGGGAGGAATTGTTCAGTGAAAATTTTGAAGGAGGAGATGAAGATGTCAATGTCTTGGCCTATCGCTTTGGTGACTTGGCTTCAAGCCCTCAATAG 1035 0.4638 MDYLVQEEYLEAFSSQLGGRPEMIPPPQPIEGLHDIGPPPFLTKTFDVVDDPTTNHIVSWSRAGTSFVVWDPHAFSTNILPRHFKHNNFSSFVRQSNTYGFRKIDPDKWEFANEGFMRGHRHLLKNIRRRKAPSQPGFSQEAQGCVEVGQFGLDEEVDRLRHDKQVLMMELVKLTQQQQNTRAYLQAMEQRLQGTEVKQQQTMAFLARAMKNPAFLQQLVQNKEKRKELEEAMTKKRRRPIEQGPSGVGASSSSGAEKDPVKAEPLEFEDYGFQVSELEVLAMEMQGYGRGRREMKEALEPSEKLDKELDEGFWEELFSENFEGGDEDVNVLAYRFGDLASSPQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02792 344 PRINTS Heat shock factor (HSF) domain signature 79 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach1g02792 344 PRINTS Heat shock factor (HSF) domain signature 92 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach1g02792 344 PRINTS Heat shock factor (HSF) domain signature 41 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach1g02792 344 SMART hsfneu3 37 130 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach1g02792 344 MobiDBLite consensus disorder prediction 226 263 - -
Bach1g02792 344 MobiDBLite consensus disorder prediction 226 242 - -
Bach1g02792 344 Pfam HSF-type DNA-binding 41 130 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach1g02792 344 FunFam Heat shock transcription factor 1 34 131 - -
Bach1g02792 344 Gene3D - 34 131 IPR036388 -
Bach1g02792 344 Coils Coil 157 177 - -
Bach1g02792 344 Coils Coil 219 239 - -
Bach1g02792 344 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 27 262 IPR027725 -
Bach1g02792 344 SUPERFAMILY "Winged helix" DNA-binding domain 37 130 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02792 Bach-Chr1 38495354 38496935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02792 21 342 HSF AT3G22830 51.657 8.29e-123 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bach1g02792 HSF_DNA-bind 5.7e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02792 K09419 - gmx:100794264 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00564 8 3655073 3656693 Bach1g02792 1 38495354 38496935 BWGD