Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02791 ATGTTTCCTGGAGCCATCTCCAATTCGACTTCTTTGTCCGAAGAAGCCAGTGTCTCTTCTGGCATAAGAGTTCAGGACTTGGCTGGGTTAAATGGTGTAGTCTCAACCGTTTCTCCTCAGCAGCCAGCTCTGAAGATCAAGAAAAAGAGAAGCCAACCAGGAAATCCAGACCCAGATGCTGAAGTGATTGCTTTGTCCCCAAAGACCCTTTTGGCCACCAACAGATTTGTGTGTGAGATCTGCAAAAAGGGTTTTCAAAGAGATCAGAATCTTCAACTTCACAGAAGAGGTCATAACCTTCCATGGAAGCTCAAGCAAAGGAACAGCAAAGAGGTCAAAAAGAAAGCCTATGTTTGCCCCGAGCCTTCATGCGTTCACCACAATCCGTCAAGGGCTCTGGGTGATCTTACAGGAATTAAGAAACACTACTGCAGAAAACATGGAGAGAAGAAGTGGAAATGTGAAAAGTGCTCAAAGATCTATGCAGTTCAATCAGATTGGAAGGCTCATTCCAAAACCTGTGGAACAAGAGAATATAGATGTGATTGTGGAACCCTTTTCTCCAGGAAGGACAGCTTCATTACTCATAGGGCATTTTGTGATGCATTGGCTGAAGAAAGTGCAAGACTCTCCGCAAACCAAATAGCTTCCACAAATCCGTTGGTTCAATCTCTCTTTCTTTTCCCAAACCAGCAGAACTTCTTCAATCCATGGAACCCATCTCCAGAAAACCCTAACCCTAATAACTTTGTCAATGCTGGTGCTGCCCTCCAAATCAAGCCTGAAGCTCAGCACTTCCAGATGCCCACTCTCTCTTCTTCATCATTTCTTCATCAACCACAACACCAAGACCACAAGATCAGCATGGCCATGATAAACTCACCCTTCCACGTCACCCCGCAACCTTCCTCAAACACTGCCATGTCAGCTCACCTTTCAGCCACTGCGCTCCTTCAGAAGGCAGCAACCATTGGTGCTACAACTATCCCAGGCCCGGCTCCTGCTTCTGCTTCTGCCGTTGGTGTTGGGCAAGTGGGTCACGTGACTCATCTCGGCATGGCCGAGTTTGGAACAATGAGTCAGCTTGATTCGGTGGGTCACAACTACGTCAACTTGAGAGGCTTCGCGTCCAGGGATCTTAAGAATGACCGTCTCACGAGGGACTTTCTGGGTCTAACTGGGGACGCCAACGGTAGTGACGGAGGAAATAACGGTGCCGTTGACGTTAGCATCAACGTCAAGGATATGCTGACTTTCACGGGGGGCATAGAGTACCAACCATACGAACATCACCACCACCACTCGCTCTTAAAGTCGCAACAAAGTTTCGGATTTGTTGGGACTACCACTGCCCCGGAGACTTGGGGGAATTGTTGA 1377 0.4793 MFPGAISNSTSLSEEASVSSGIRVQDLAGLNGVVSTVSPQQPALKIKKKRSQPGNPDPDAEVIALSPKTLLATNRFVCEICKKGFQRDQNLQLHRRGHNLPWKLKQRNSKEVKKKAYVCPEPSCVHHNPSRALGDLTGIKKHYCRKHGEKKWKCEKCSKIYAVQSDWKAHSKTCGTREYRCDCGTLFSRKDSFITHRAFCDALAEESARLSANQIASTNPLVQSLFLFPNQQNFFNPWNPSPENPNPNNFVNAGAALQIKPEAQHFQMPTLSSSSFLHQPQHQDHKISMAMINSPFHVTPQPSSNTAMSAHLSATALLQKAATIGATTIPGPAPASASAVGVGQVGHVTHLGMAEFGTMSQLDSVGHNYVNLRGFASRDLKNDRLTRDFLGLTGDANGSDGGNNGAVDVSINVKDMLTFTGGIEYQPYEHHHHHSLLKSQQSFGFVGTTTAPETWGNC 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02791 458 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 98 IPR013087 -
Bach1g02791 458 SMART c2h2final6 152 172 IPR013087 -
Bach1g02791 458 SMART c2h2final6 76 98 IPR013087 -
Bach1g02791 458 SMART c2h2final6 117 147 IPR013087 -
Bach1g02791 458 Gene3D Classic Zinc Finger 145 209 - -
Bach1g02791 458 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 35 414 IPR031140 -
Bach1g02791 458 SUPERFAMILY beta-beta-alpha zinc fingers 75 172 IPR036236 -
Bach1g02791 458 FunFam protein indeterminate-domain 12-like 55 123 - -
Bach1g02791 458 FunFam protein indeterminate-domain 5, chloroplastic-like 130 209 - -
Bach1g02791 458 ProSitePatterns Zinc finger C2H2 type domain signature. 78 98 IPR013087 -
Bach1g02791 458 Gene3D Classic Zinc Finger 55 124 - -
Bach1g02791 458 MobiDBLite consensus disorder prediction 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02791 Bach-Chr1 38485184 38488315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02791 15 447 IDZ Gene Family AT4G02670 51.454 2.16e-135 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach1g02791 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02791 K25870 - gmx:100788975 542.732