Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02739 ATGAGCTCCTCAGAGTCTCCTTCTATACCTTTCAGATCTAAGAAGCCCCATCTTCACCACTCCGCTCCTAAATCCCAATCACCAGATTCCATTCAATTGAGCTCCAAAACCCCAGAGAAGCCCCCACAATTCTCAAGCCGTTCACGCAAACGCGGCGTTGCACTTTCTATCAAAGAAATCAGGAAGGTTGCTCAAACCCTCCAGCAAAGGAATCGCGATCAGCATGATGATCCGACGGCGCAGATCAAATCTGCCAGAAGGCAGATTACAATGTTGTCGCCCTGTAAATCCAAGGTGCCAGTTGATGAACCCACCAAGCTGCCGGAAAAGTATGAAATATTGGCCGAGTTCTTCGATAGTTTGGATAGCTCGATTCGGTTATTGCGTTTAAAAGGGTCGACCCCAACTTTCATGAATATTTGCCCAAAGATTCAATGTTTAACTGATAGGAGGTTTACTCATGGGCACTTGGCCCAGTTGAAATTTATCTTACGCGAGGCAATTGTTATAAAGAAGGTACTTATGTTAGACGAACGGACAAGTTGTATGAAGCCAGATCTCCATATTACATTAAATCCTGATGCGATAGAATCTGATGCAAAGTTGCTCTCGGAATCTCGAAGTATGTCACTGAGGAAGTTTGTTCGTACATGGCTGAGAGATTTTCTTAAATCCCATTCCGAGGGTGATGAAGTTCCAGAAGAGATGTTGCCTGAACCATTCAATCCCCCAAAGCAAGACCATTTAGACTCGTTGAAGATTTCCTCATTCCCTGCAGAGGCGTCACCTGGCTCATGTGCAGCTCATCCTTCAGCGATATTGTCAGCTTGCAAGCGGGATAATGAAAATCTAGATAAACGAGAACCTGCTTATGTTAATGACAAGAATCGGGATTTGATGTCAAGTGTAAACAGCGGAGAAAACTTGTCAATGCCTGTCAAGATGGCTATTGGATCAGTTAACCAGCAACCAGCAATAGCCACTCATATGTCTCAATGTTTTAAAAAGCACTTCTCTCGGAAATTTATGAGAAATGAAGCTGATAATCCACAGCAAAAATTCCCATCAGATTCATTCCAACCTCTGTCTTTTCCAGTTACAGAGTCAAGCCTGAAGAAAAATTCTTCCTATGAGGAAACAAGGTCTCTTCCTAATACATCCTCATCTAAGTTGGCCTCAGAAGCTGCCAGTAGTGAAAGGTGTCCAACAATTTGTGCTTCTCCAGGTCGTTTCACATCATCAGATGTTCCGGCTGCCACTCCAAGAAAAACTACTGAGTACTCAGAGAATGAAGATGGTTCTGTCAAAGACATTGATTCCATGTCAACTCCAGCTAAACTTGCTTCTACTCCGTCTAGGCTTATGACTTCCACTCCTTCACTGCCTCCGCCTAAGAGATGTTATATGAGCCCTGATGAAAACTCTTCCAGCTCCCCAAACAAATTGGTTAGGCGTCCTCCTCGTTCAAGATCATTGAAATTTGACACTCCGGTGAAGAATGAGGAGACTGAGAGTGGATTTATGGACGCTGGTAGTATATCAATTGATGAAGATATTTTTGACATTCTCCCAGAGAATCTTCTCCAGTCGATTAGAGAAAAGGAAAGAATAGCAATGGAAGAAAGAAACCCAGCCATCTCACGAGCCAAGAGGCGACAAAAAATGATTGCCAGTCTCCCTAAGCTCTTTAACATGATTCATCTTTTGTTTCACTCAATAAACCGTTCTGTTATCACAAAAGAGGAGCTAATAAGCAAAATAATATCAAGCCATTGTGACATTGTTGACAGAAGGGAAGTGGAGGAACAACTGACTTTGTTGCTAGAACTAGTTCCAGAATGGATTTCTGAAAAGAAAGTATCTAGCGGGGATTTGCTTTTCAGCATAAACAAAATGTTGAACGTTGAGACTCTGCGCTCGCGGCTTGAAGAAGCAAATTGGCTATGGACATTGTCACCAACCATAAAGTCACATCATAAGTTACGTGCCTTGCTTGGCTACCAGGCATTATGTGAGAAAAGCATGAGGCAGAGAGTTGAGTTCCGAACGCCCCAACACCCATCTCTGGGCACAAACAACTGGGGAGGTGCGTCTCCTTTGTTAGCAAGGAACATACCAAAAGAATCACTTGAATCCAAGTATGCGAGACTCAACTCTGCCCGCACCAGCCATGAGATCTTTCTAACTGACAATCACCATTTGAATCACTCGTTTCAAGACAAGGCATCCAAGCATGAACATGCTGCCACTGCTACAAGGGGAATACTATACAATCTACTGTTTCAGCGCAAGGAAAAGACTACTGTTGTTTTGGGTTCCAAGTCAAAGAGGAGAATATGGTTTCCGAGATTGGATCCTCAAAATAGGTGGCCTAATGGCTGGTGTTGA 2388 0.4338 MSSSESPSIPFRSKKPHLHHSAPKSQSPDSIQLSSKTPEKPPQFSSRSRKRGVALSIKEIRKVAQTLQQRNRDQHDDPTAQIKSARRQITMLSPCKSKVPVDEPTKLPEKYEILAEFFDSLDSSIRLLRLKGSTPTFMNICPKIQCLTDRRFTHGHLAQLKFILREAIVIKKVLMLDERTSCMKPDLHITLNPDAIESDAKLLSESRSMSLRKFVRTWLRDFLKSHSEGDEVPEEMLPEPFNPPKQDHLDSLKISSFPAEASPGSCAAHPSAILSACKRDNENLDKREPAYVNDKNRDLMSSVNSGENLSMPVKMAIGSVNQQPAIATHMSQCFKKHFSRKFMRNEADNPQQKFPSDSFQPLSFPVTESSLKKNSSYEETRSLPNTSSSKLASEAASSERCPTICASPGRFTSSDVPAATPRKTTEYSENEDGSVKDIDSMSTPAKLASTPSRLMTSTPSLPPPKRCYMSPDENSSSSPNKLVRRPPRSRSLKFDTPVKNEETESGFMDAGSISIDEDIFDILPENLLQSIREKERIAMEERNPAISRAKRRQKMIASLPKLFNMIHLLFHSINRSVITKEELISKIISSHCDIVDRREVEEQLTLLLELVPEWISEKKVSSGDLLFSINKMLNVETLRSRLEEANWLWTLSPTIKSHHKLRALLGYQALCEKSMRQRVEFRTPQHPSLGTNNWGGASPLLARNIPKESLESKYARLNSARTSHEIFLTDNHHLNHSFQDKASKHEHAATATRGILYNLLFQRKEKTTVVLGSKSKRRIWFPRLDPQNRWPNGWC 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02739 795 Gene3D - 516 646 IPR038090 -
Bach1g02739 795 CDD Cdt1_c 522 643 IPR032054 -
Bach1g02739 795 PANTHER DNA REPLICATION FACTOR CDT1 10 645 IPR045173 GO:0003677|GO:0030174|GO:0071163
Bach1g02739 795 SMART CDT1_2 107 239 IPR014939 -
Bach1g02739 795 MobiDBLite consensus disorder prediction 369 396 - -
Bach1g02739 795 MobiDBLite consensus disorder prediction 369 494 - -
Bach1g02739 795 MobiDBLite consensus disorder prediction 1 53 - -
Bach1g02739 795 Pfam DNA replication factor CDT1 like 107 206 IPR014939 -
Bach1g02739 795 MobiDBLite consensus disorder prediction 23 42 - -
Bach1g02739 795 Pfam DNA replication factor Cdt1 C-terminal domain 526 620 IPR032054 -
Bach1g02739 795 SUPERFAMILY "Winged helix" DNA-binding domain 103 241 IPR036390 -
Bach1g02739 795 FunFam CDT1-like protein a chloroplastic 516 646 - -
Bach1g02739 795 CDD Cdt1_m 100 248 IPR014939 -
Bach1g02739 795 MobiDBLite consensus disorder prediction 407 424 - -
Bach1g02739 795 MobiDBLite consensus disorder prediction 470 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02739 Bach-Chr1 38052899 38057105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02739 442 646 Core DNA Replication Machinery Family AT2G31270 53.953 1.61e-56 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02739 K10727 - qsa:O6P43_006919 710.294