Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02729 ATGGGATTGAAGAAAGGGCCATGGACTCCAGAAGAAGATCGCATGCTCATCAACTATATCAACGCCAACGGCCATGGCAACTGGCGTGCCCTTCCCAAACAAGCTGGCTTGTTAAGGTGTGGAAAGAGTTGCAGACTCCGGTGGACTAATTATTTGAGGCCAGATATCAAGCGGGGAAACTTTACCAGAGAAGAAGAGGATACCATAATCAACTTGCATAAGATGTTAGGAAACAGATGGTCAGCCATTGCAGCAAGGTTACCCGGACGCACTGATAATGAGATAAAGAATGTGTGGCACACCCACTTGAAGAAGAGGCTCCCACAAAACCAACAGAAACACGACAGAAAACGAAACACAAAGCAAATAGCCAATTCTACTGCTAAATCAAACCAAGACACCAAAAAAGAGGAAGACCTTGTGAATAGTGAAATCACAGAGCTGTATGGACCACTTTCTCCCACACAGTGTTCATATAGTGACATGTCCACCCTCACCACAAGTGACAACACCGACCACAACAGTACCACTGACATGTCCATTAATGATCCACCGACGGAGAATAATGCCCTCTCGTTGGACGACGACTTCTGGTCGGAAGTGCTGTCTGCTGATAATTCCGGTGAGGCTAGTGATTTTCCGGCAATTCCTGACGAACAGTTTTTTCTGTTCCCGTTATCTTCATTGGTGACAAGCGAACCGGAAAATGCTACTGGTTCATCAAGTTCAAGCATGTATGATGGAAGAGACTTCTGGTATAACCTTTACACGAGAGCAGGGGAATCAGCAGGGCTACCAGAATTTGATGTTGACTATGTTCATTCTTAA 828 0.4541 MGLKKGPWTPEEDRMLINYINANGHGNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTREEEDTIINLHKMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLPQNQQKHDRKRNTKQIANSTAKSNQDTKKEEDLVNSEITELYGPLSPTQCSYSDMSTLTTSDNTDHNSTTDMSINDPPTENNALSLDDDFWSEVLSADNSGEASDFPAIPDEQFFLFPLSSLVTSEPENATGSSSSSMYDGRDFWYNLYTRAGESAGLPEFDVDYVHS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02729 275 ProSiteProfiles Myb-like domain profile. 1 52 IPR001005 -
Bach1g02729 275 FunFam Transcription factor MYB15 59 140 - -
Bach1g02729 275 Gene3D - 2 58 - -
Bach1g02729 275 SUPERFAMILY Homeodomain-like 1 99 IPR009057 -
Bach1g02729 275 MobiDBLite consensus disorder prediction 152 184 - -
Bach1g02729 275 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 53 107 IPR017930 -
Bach1g02729 275 CDD SANT 60 103 IPR001005 -
Bach1g02729 275 Pfam Myb-like DNA-binding domain 58 103 IPR001005 -
Bach1g02729 275 Pfam Myb-like DNA-binding domain 5 52 IPR001005 -
Bach1g02729 275 MobiDBLite consensus disorder prediction 102 138 - -
Bach1g02729 275 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 209 - -
Bach1g02729 275 CDD SANT 7 52 IPR001005 -
Bach1g02729 275 SMART sant 4 54 IPR001005 -
Bach1g02729 275 SMART sant 57 105 IPR001005 -
Bach1g02729 275 FunFam MYB-related transcription factor 4 57 - -
Bach1g02729 275 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 52 IPR017930 -
Bach1g02729 275 Gene3D - 60 139 - -
Bach1g02729 275 ProSiteProfiles Myb-like domain profile. 53 103 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02729 Bach-Chr1 37946222 37947680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02729 1 268 MYB Transcription Factor Family AT2G31180 48.529 6.47e-76 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach1g02729 Myb_DNA-binding 2.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02729 K09422 - gmx:100775603 315.079