Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02718 ATGCCCTTTGAGAAGAACTATAGTAATATGATTGGTGTGTTAAAGCGTTTGAAGCCAGTGCTTGATGATGTTGTTGATTATAAAATCCATTCAGATGAAATCCTATGTAAAGGGTGTGAAGAATTGGATATGGTTGTTAATGAAGCTAGAGAGTTCATGGAAAAATGGTGCCCAAATATGAGCAAGATTCATGCCGTTCTACAAAGTGGACGATTATTGATGAGAGTTCAGAGCTCGTCGCTTGAGATTTGTCACATTATATTTATATCCCTAGAGTCATCTCCATCTACTGCAATTTCAGTTAGTCTTCAGCACTATATGCAGGAACTTCAGTCTTTGAAGAAGGAACCAGCAAATATGTATATAGAAGAGGTGCTGAGAAATCAAACAGAAGATACAAAATCATGCAACGAAGATATTAAGAAAATTATTGAGATACTTAGCTTGAAATCAAACCAGGAACTCTTGAAAGAAAGTATTGCTGTGGAAAAGGAAAGATTGAATGCTGAAGCCAATAAAAAGAAAGGGCAATTAGATGAAATTAACCAAATTGTAAATCTTGTCTGCAAAGTACGTGATTATGCTATGAAATTTGAGTGCCTTGAAGTCAAATGTGGTGTCTCAGTCCCTCCATATTTCCGCTGTCCTTTATCTCTGGACCTCATGTTGGATCCTGTTATCGTGGCTTCAGGTCAGACATATGAGAGGCTGTCCATACAAAAGTGGCTTGATCATGGCTTGATTGTTTGTCCCAAGACTCGTCTGAGACTTACCCATACAAATGTAATTCCCAATTATACTGTCAAAGCTATGATAGCAAATTGGTGCGAGGAAAACAATGTCAAGCTTCCCAGTAACCCCTTGCACAATAATTCAGTCTGTGTCACAACCCCCTCAGATGATTTATTGCCTCAAGATTTAGGTTGTGAAAATAGTTTTGGATCTTTACATAATAGCAATTCCACATCAAAATCATCTGTTGAAACTAGTAATGCATTTGAGCAGCAAAAGGTTGATATCTCTTCCAGATTAAGTGGAGGATCCAACGGATGCCAGAGTGGAGAAATAGAAAAATTTGAGCAACAATCTCTTGCACCTTCATATATTTACAGCAGAAGTGAATCATTCGCAAGTTCTGTTTCCAGTAGTGATTATGTACTTCCTGTTTCAAAAGAGTTGTCTGGGATATCCAGTAAGCAGGAAAATGTGCATCAGTTGTCTGGAGAAATCACCAATGGGGATCCTCCTGCTTCTTCTCCTGCAAATAAAGAATCGGGGAGTTCTCCTTGGTTATCAGGAAAGCAATTTGTAAACCCTGGACCAAAAATGGGTGTGATAGAGAATGGAAATAATAATAGTCTTTCTAGAGGAAACTCCCTTTCTGTTTCTAACTTGGGACCCAATGAGTTGACCACATCTCATGTGAATAAGTTGATTGAAGACCTTCACAGCCAATCAAATGAAGTGCAAACCAGGGCTGCAGAAGAATTGAGGCTCCTTACAAAGGATAGCATGGAAAACCGTATAATTATTGGCCAGTGTGGGGCTATAATTCCTTTACTTTCGCTGCTATATTCAGCTAAGAAACTAACACAAGAGCATGCGGTGACAACTTTGCTGAATTTATCAATTAATGAAGACAACAAGGCCTTGATTGCTGAATCAGGAGCAATAGAACCTCTTATTTATGTTTTGAAAACAGGAAATGATGGAGCCAAGGAGAATTCTGCTGCAGCTCTATTCAGCCTCTCTGTGATAGAGAAAAATAAGGAAAAAATTGGTCGTTCTGGTGCAGTTAAAGCTTTGGTGGATCTTCTAGGCTCAGGAACTCTTAGAGGAAGGAAGGATGCTGCTACTGCTTTATTTAACCTATCAATCTTTCATAATAATAAAGCTCGTATAGTTCAAGCTGGAGCTGTGAAGTATCTGGTTCAGTTAATGGACCCTGCTGATGGAATGGTTGACAAGGCTGTTGCTCTTCTGGCAAACCTTTCAACAATTCCAGAGGGCCGGTTAGCAATAGCAAGGGAAGGAGGTATCCCCTCACTAGTTGAAATTGTTGAATCAGGTTCCCAGAGGGGAAAGGAAAATGCTGCTTCCATTATCTTGCAACTATGCCTTCATAGTCCCAGGTTTTGTACCCTGGTTCTGCAAGAAGGAGCTGTACCTCCCCTAGTTGCATTATCTCAGTCTGGTACACCACGAGCAAAGGAGAAGGCACAACAGCTTCTGAGTCATTTTCGTAATCAACGGGAAGGAGCCACAGGGAAGGGGAAATCATAGATAGTTTTGGTTATTTAACTGCCTTATTTTTGTTTTTCCCTTGCCTTAGTTGCTAGTGATAAACTTCTTCCTCTCTTTGCCACATTGCTATTATACCTAGACTTTGAGTACTCCTTTTCGTGAATTCCTTTGATCCTTACTTGATTTATTTCATAATTTATAGTCATGAGCTTTTGCTACTCTTCTGGGTGGCTTGTAATAGTTTGTTCTCGGGTTCCAAATGAGAGTGAAT 2515 0.396 MPFEKNYSNMIGVLKRLKPVLDDVVDYKIHSDEILCKGCEELDMVVNEAREFMEKWCPNMSKIHAVLQSGRLLMRVQSSSLEICHIIFISLESSPSTAISVSLQHYMQELQSLKKEPANMYIEEVLRNQTEDTKSCNEDIKKIIEILSLKSNQELLKESIAVEKERLNAEANKKKGQLDEINQIVNLVCKVRDYAMKFECLEVKCGVSVPPYFRCPLSLDLMLDPVIVASGQTYERLSIQKWLDHGLIVCPKTRLRLTHTNVIPNYTVKAMIANWCEENNVKLPSNPLHNNSVCVTTPSDDLLPQDLGCENSFGSLHNSNSTSKSSVETSNAFEQQKVDISSRLSGGSNGCQSGEIEKFEQQSLAPSYIYSRSESFASSVSSSDYVLPVSKELSGISSKQENVHQLSGEITNGDPPASSPANKESGSSPWLSGKQFVNPGPKMGVIENGNNNSLSRGNSLSVSNLGPNELTTSHVNKLIEDLHSQSNEVQTRAAEELRLLTKDSMENRIIIGQCGAIIPLLSLLYSAKKLTQEHAVTTLLNLSINEDNKALIAESGAIEPLIYVLKTGNDGAKENSAAALFSLSVIEKNKEKIGRSGAVKALVDLLGSGTLRGRKDAATALFNLSIFHNNKARIVQAGAVKYLVQLMDPADGMVDKAVALLANLSTIPEGRLAIAREGGIPSLVEIVESGSQRGKENAASIILQLCLHSPRFCTLVLQEGAVPPLVALSQSGTPRAKEKAQQLLSHFRNQREGATGKGKS 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02718 760 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 597 639 IPR000225 GO:0005515
Bach1g02718 760 ProSiteProfiles U-box domain profile. 208 282 IPR003613 GO:0004842|GO:0016567
Bach1g02718 760 SUPERFAMILY RING/U-box 207 284 - -
Bach1g02718 760 SMART arm_5 545 585 IPR000225 GO:0005515
Bach1g02718 760 SMART arm_5 504 544 IPR000225 GO:0005515
Bach1g02718 760 SMART arm_5 667 707 IPR000225 GO:0005515
Bach1g02718 760 SMART arm_5 586 626 IPR000225 GO:0005515
Bach1g02718 760 SMART arm_5 627 666 IPR000225 GO:0005515
Bach1g02718 760 Coils Coil 152 184 - -
Bach1g02718 760 FunFam RING-type E3 ubiquitin transferase 209 281 - -
Bach1g02718 760 PANTHER U BOX DOMAIN-CONTAINING 4 748 - -
Bach1g02718 760 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 638 679 IPR000225 GO:0005515
Bach1g02718 760 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 556 598 IPR000225 GO:0005515
Bach1g02718 760 Pfam Armadillo/beta-catenin-like repeat 506 543 IPR000225 GO:0005515
Bach1g02718 760 Pfam Armadillo/beta-catenin-like repeat 588 625 IPR000225 GO:0005515
Bach1g02718 760 Pfam Armadillo/beta-catenin-like repeat 545 584 IPR000225 GO:0005515
Bach1g02718 760 SUPERFAMILY ARM repeat 474 747 IPR016024 -
Bach1g02718 760 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 208 283 IPR013083 -
Bach1g02718 760 SMART Ubox_2 212 275 IPR003613 GO:0004842|GO:0016567
Bach1g02718 760 MobiDBLite consensus disorder prediction 736 760 - -
Bach1g02718 760 Gene3D - 462 610 IPR011989 -
Bach1g02718 760 FunFam RING-type E3 ubiquitin transferase 461 753 - -
Bach1g02718 760 Gene3D - 614 757 IPR011989 -
Bach1g02718 760 Pfam U-box domain 209 280 IPR003613 GO:0004842|GO:0016567
Bach1g02718 760 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 515 557 IPR000225 GO:0005515
Bach1g02718 760 CDD RING-Ubox_PUB 210 260 IPR045210 -
Bach1g02718 760 MobiDBLite consensus disorder prediction 398 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02718 Bach-Chr1 37892561 37895529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02718 2 760 U-box Gene Family AT3G54790 55.267 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02718 - - gmx:100804684 1003.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g02718 1 37892561 37895529 Bach1g02718 1 37892561 37895529 ECH