Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02710 CATCGTCTCTGGGAACCGAAAGCTTCATGGTTAAATTTTCTTGAATAGCGAATTGAATTTCCGGAAAATTCAATCGGATACGGAAATATCTCCCCTCTTCTTCGGGCAATCGAATCGAATTTGTTTTTTCGCAAAGAAAACGAATTGAAATTCATAGGGAGGCTATCCAGGGTTGCTTCAATGCTACTGTGGTATGGTGAAAGCATCAATGTAGTGTATCCTTAGGCGGCTTTGGCTCTGCCACACCTTGATGATATAGGAAGAAGCCGTTAACATATTAGATTATGGAGGAAGACGAAGATAGGATTTTTCTTTCTAGTTTGGGCGTTAAGTCTGCGAATCCCGAAGATATTGAACGGGACATATTAGCTAAGGCAAGGAACGAGGATGTGGCCATTACTGAAGCTGAAGGGAGTGCCAAGGAGGAATCTCCTCAGAAGTTTGAAAATGTTGATCCATCGTATACTAGCAAAGCAGAAATTTATCATAAGTTAAGGGCTGTAGAATTTGAAATAGATGCTGTTGCCTCCACCATTCAACAAGTGGGAGATGTTGTGGACAATGGAGATTCTAGTGATGTTGGTGATGATGACATCCAGGAGAAAAGGATTACTAAAGATGATTCATCCGATGATTTGAATCTTCAGCAAGCTCTTGCTGCAGATAGGCTAAGAAGCCTAAATAACACAAAGGCTCAACTAGAGAAAGAACTTTCAGATTTATGCGAGGAGAAACCTTCTGAAATTATTGAGGATGAAAATTTGCTCCTTAGTTTGGTTAAGGAAGATTCAAGACCTAAGAGAAAGCTAAAAGAAGTTCAAAAATTACCCAAAAGCTCAGGAAAACGACACAGAAGAGTCTCATTTAATGACGATGTTGATTTTGACTCAGTTTTGGATACAGCCTCTGCAGGCTTTGTTGAAACAGAAAGGGATGAATTGGTGAGGAAGGGAGTTTTAACCCCTTTTCATAGGCTGAAGGGCTTTGAGCGCCGTATTCAACAAGAAACTTCTAGTAGTTATAATACAGCCGAGGAAGAAAACATTTATGATCCTGCTTCTTCTAGCGTTGAAAGAACTGCCAGGTCAATATCTCAGGCAGCAAGAGCTCGCCCAACAACCAAGCTGCTTGAATCTGAAACTCTGCCAAAGCCTGAGACACCCACTCGTCCTTTTCACTGGCTCAAAAAACCACTGAAATTTCATCAATCCCAAGAAGGAAAAGTAGAGAAAAATAAAGATTCAAAAAGGAGGAAGAAGCGGCCTTTGCCTGGTAGGAAATGGACAAAGCTTGTCTCTCGGGAGGAAAACAACGTAGCAGAAAGTGAATATGCAAATGGTGATTTGGTCACTTCCAGTTCTGAGAATTTAGAGGCAGAAGATGTTGAACATGATGATGATCAACCTTCATATGTAACCTTGGAAGGTGGATTGAAAATCCCAGATAACATTTTTGATGGTCTATTTGACTATCAAAAGGTTGGTGTTCAGTGGTTGTGGGAACTGCATTGCCAAAGAGCTGGTGGTATTATTGGTGATGAAATGGGTCTTGGTAAAACCATCCAAGTTCTATCTTTTCTCGGTGCTTTGCACTTCAGTGGCATGTACAAACCAAGCATTGTTGTCTGTCCTGTTACACTCTTGCGACAGTGGAGAAGGGAAGCTAGAAAGTGGTACCCAAAGTTTCGTGTAGAGCTTTTACATGATTCTGCCCAGGATCCCACTGATAGAAAGAAGCTCGCCAAATCTGACGAAACAGATTATGAGAGTGATAGTTCAATTGACAATGATTATGAGAGTAGTACACCATCAAGAAACAAAAGAAAATGGAAATCCTTAATAAATCGTGTCATGAAATCAAAATCTGGATTACTTATCACCACTTATGAGCAACTCAGAATTTTGGGGGACCAGTTGCTTGACATGGAATGGGGTTATGCAGTTCTTGATGAAGGACATAGAATAAGGAATCCAAATGCTGAAATTACCCTGGTTTGCAAACAACTACAGACTGTACACCGCATCATCATGACTGGTTCACCAATTCAGAATAAATTGACTGAACTATGGTCATTGTTTGATTTTGTCTTCCCTGGAAAATTGGGTGTGTTGCCTGTATTTGAAGCTGAGTTTGCAGTTCCCATATCAGTTGGTGGATACGCAAATGCTTCACCATTGCAAGTATCAACAGCATACAGCAGATGTGCTGTGGTGCTTCGTGATTTAATCATGCCTTATCTTCTTCGACGAATGAAAGCTGATGTAAATGCCCATCTTCCGAAGAAAACTGAGCATGTTCTATTTTGCAGCCTTACATCAGAGCAAGTATCTGCTTATCGAGCATTTTTAGCAAGCACTGAAGTGGAACAAATCTTAGATGGACACAAGAATTCTCTTTATGGAATTGATGTGATGCGTAAGATCTGCAACCACCCTGACCTGCTTGAGAGGGAACATGCCCATAGGAATCCAGATTATGGAAATCCAGAACGTAGCGGAAAAATGAAAGTTATAGCTCAAGTACTTAATGTTTGGAAGGAACAGGGTCATCGTGTACTCCTTTTTACTCAAACCCAACAAATGCTCGACATAATTGAGAATTTTCTGACCACTGCTGGTTATAATTACCGAAGATTGGATGGGGTCACCCCCGTAAAACAGAGAATGGCTTTAATAGACGAATTTAATGCCTCAAGTGAGGTATTTATCTTTATTTTAACAACCAAAGTTGGGGGTTTGGGGACGAATCTTACTGGTGCAAACAGGGTGATCATCTTTGATCCTGATTGGAATCCTTCAACTGACATGCAGGCCAGAGAGCGTGCTTGGCGTATTGGTCAGAAACGGGATGTAACAGTTTATAGGTTGATCACACGTGGGACTATAGAAGAGAAAGTGTATCACCGACAGATTTACAAACATTATCTCACAAATAAGATATTGAAAAACCCACAGCAGAGAAGGTTCTTCAGAGCTCGGGATATGAAAGATCTTTTCACACTGAATGTGGATGGAGACAATGGGTCAACTGAAACATCAAATATTTTCAGTCAAATATCTGAGGATGTAAATATTGTTGGGACACGTAATGATAAGCAGGATAAGCGGAAACATCCCCAAGCTGCTGAACCGTGTCCTAATGATGTTGCAGCTGAAAATGATGGCAAATCAGAGACAGTCCCCTCAAGGGGAAAGGGGAAAGAGAAAGTTGATCGTAGTGATGAGGAAACAAATATATTGAAAAGTCTTTTTGATGCCAATGGAATACACAGTGCCGTGAACCATGATTTGATCATGAATGCTCATGATGAGGAGAAGATAAGGCTTGAGGAGCAAGCTTCCCAGGTTGCCCAAAGAGCTGCAGAAGCTTTACGTCAGTCACGAATGCTTCGAAGCCGTGACAGCGTCTCTGTTCCTACATGGACAGGAAGGTCAGGAACTGCCGGTGCACCGTCATCTGTTCGGCGGAAGTTTGGTTCAACCGTGAATGCTCAGTTGACAAATAATTGCAAGGCATCAGATGAATTACCCAGCAATGGAACTAACAAATTAAATGGCTTTGCTGCTGGGGCTTCTGCTGGTAAGGCACTGTCTTCAGCTGAACTTTTGTCTCGACTCCGAGTTAACCAAGAAAAAGCCGTTGGAGCGGGGCTTGAACATCAATTTGATTCGGCCTCAAGCTCTACTAATCAAGCAAGAATGACAGATGTTGGGCCTTCTAGGGCTTCTGAAAAATTAACTGGTGTGCAACCTGAAGTATTGATTCGGCAAATCTGTACCTTTCTCCAACAGAGAGGGGGTAGTTCCAATTCAGCAAGCATAGTTCAGCATTTCAAGGACAGGATACCCTCAAAGGATGTTGCCCTTTTCAAGAATCTGTTAAAGGAAATAGCAACTCTGGAGAAAGGACCAAATGGATCGCATTGGATTCTGAAGCCAGACTATCAAGAATGATATACTTTTAAGCTGTACTTCGATGCTCACCGCACAGACTATGAAGCCTTACTTGTCTTAGTCATCAAGGGTGTTAGTTTTAGACCGCTAAGTTTTGTTTGGCTCTAACTTATTTGCGGGACACAGGTAAAAAAAGAAATTATCGCCATCTTCCGTAGGTGGGTTTATAGCAACAATTTTGTAAATCCAAAAAGAGACAAGATAGAAATATAGGCACCTTTTT 4176 0.4143 MEEDEDRIFLSSLGVKSANPEDIERDILAKARNEDVAITEAEGSAKEESPQKFENVDPSYTSKAEIYHKLRAVEFEIDAVASTIQQVGDVVDNGDSSDVGDDDIQEKRITKDDSSDDLNLQQALAADRLRSLNNTKAQLEKELSDLCEEKPSEIIEDENLLLSLVKEDSRPKRKLKEVQKLPKSSGKRHRRVSFNDDVDFDSVLDTASAGFVETERDELVRKGVLTPFHRLKGFERRIQQETSSSYNTAEEENIYDPASSSVERTARSISQAARARPTTKLLESETLPKPETPTRPFHWLKKPLKFHQSQEGKVEKNKDSKRRKKRPLPGRKWTKLVSREENNVAESEYANGDLVTSSSENLEAEDVEHDDDQPSYVTLEGGLKIPDNIFDGLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGALHFSGMYKPSIVVCPVTLLRQWRREARKWYPKFRVELLHDSAQDPTDRKKLAKSDETDYESDSSIDNDYESSTPSRNKRKWKSLINRVMKSKSGLLITTYEQLRILGDQLLDMEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGSPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPISVGGYANASPLQVSTAYSRCAVVLRDLIMPYLLRRMKADVNAHLPKKTEHVLFCSLTSEQVSAYRAFLASTEVEQILDGHKNSLYGIDVMRKICNHPDLLEREHAHRNPDYGNPERSGKMKVIAQVLNVWKEQGHRVLLFTQTQQMLDIIENFLTTAGYNYRRLDGVTPVKQRMALIDEFNASSEVFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHYLTNKILKNPQQRRFFRARDMKDLFTLNVDGDNGSTETSNIFSQISEDVNIVGTRNDKQDKRKHPQAAEPCPNDVAAENDGKSETVPSRGKGKEKVDRSDEETNILKSLFDANGIHSAVNHDLIMNAHDEEKIRLEEQASQVAQRAAEALRQSRMLRSRDSVSVPTWTGRSGTAGAPSSVRRKFGSTVNAQLTNNCKASDELPSNGTNKLNGFAAGASAGKALSSAELLSRLRVNQEKAVGAGLEHQFDSASSSTNQARMTDVGPSRASEKLTGVQPEVLIRQICTFLQQRGGSSNSASIVQHFKDRIPSKDVALFKNLLKEIATLEKGPNGSHWILKPDYQE 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02710 1222 MobiDBLite consensus disorder prediction 480 494 - -
Bach1g02710 1222 CDD DEXHc_ERCC6 393 603 - -
Bach1g02710 1222 MobiDBLite consensus disorder prediction 304 318 - -
Bach1g02710 1222 CDD SF2_C_SNF 737 862 - -
Bach1g02710 1222 SMART helicmild6 768 851 IPR001650 -
Bach1g02710 1222 MobiDBLite consensus disorder prediction 480 510 - -
Bach1g02710 1222 Pfam SNF2-related domain 396 719 IPR000330 GO:0005524|GO:0140658
Bach1g02710 1222 MobiDBLite consensus disorder prediction 242 277 - -
Bach1g02710 1222 FunFam DNA excision repair protein ERCC-6 662 941 - -
Bach1g02710 1222 MobiDBLite consensus disorder prediction 963 979 - -
Bach1g02710 1222 MobiDBLite consensus disorder prediction 1126 1142 - -
Bach1g02710 1222 Gene3D - 359 654 IPR038718 -
Bach1g02710 1222 MobiDBLite consensus disorder prediction 934 979 - -
Bach1g02710 1222 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 657 913 IPR027417 -
Bach1g02710 1222 CDD CSB_WHD 1155 1221 - -
Bach1g02710 1222 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 742 901 IPR001650 -
Bach1g02710 1222 MobiDBLite consensus disorder prediction 1124 1150 - -
Bach1g02710 1222 PANTHER SNF2/RAD54 FAMILY MEMBER 145 1204 - -
Bach1g02710 1222 MobiDBLite consensus disorder prediction 100 115 - -
Bach1g02710 1222 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 374 655 IPR027417 -
Bach1g02710 1222 FunFam Protein CHROMATIN REMODELING 8 371 654 - -
Bach1g02710 1222 Pfam Helicase conserved C-terminal domain 741 851 IPR001650 -
Bach1g02710 1222 SMART ultradead3 389 621 IPR014001 -
Bach1g02710 1222 Coils Coil 122 149 - -
Bach1g02710 1222 MobiDBLite consensus disorder prediction 1040 1060 - -
Bach1g02710 1222 Gene3D - 661 947 IPR027417 -
Bach1g02710 1222 Coils Coil 1004 1031 - -
Bach1g02710 1222 MobiDBLite consensus disorder prediction 87 115 - -
Bach1g02710 1222 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 405 604 IPR014001 -
Bach1g02710 1222 MobiDBLite consensus disorder prediction 242 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02710 Bach-Chr1 37816763 37824975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02710 737 905 RAD5 or RAD16-like Gene Family AT5G22750 32.544 9.87e-25 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach1g02710 SNF2_N 3e-59 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02710 K10841 - gmx:100820025 1852.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g02710 1 37816763 37824975 Bach1g02710 1 37816763 37824975 ECH