Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02688 ATGATAGCCATTCAAAAGGCTTCTGTTCTTCTAGTTCATATTCTCTTGCTTTCCTTTCTTCCTTCGCAGATCAAAGCATCACCAAGAACAGAAGCAAAAGCTCTAGTCAAATGGAAAAACAGCCTACCTCTGCCTCTTCCTGCTTCACTGAATTCATGGTCCCTGACCAACGTCAGCAACCTATGCAGCTGGGATGCCATTATTTGTGATAGCAATAATACAACAGTCTGGGAGATAAACCTCTTCGGTGCCAATCTCAATGGGACCCTCATTGGATTAGAATTTTCTTTCCTTCCTAATCTCACTCGCCTCAACCTGAATACCAACAATTTCAATGGGGCAATACCATCTGCAATTGGTAATCTCTCCAGGCTAAATTTCTTGGACCTGGGAAATAACCTCTTCGAAGATACACTACCATCCCAGCTAGGCCAGCTGAGGGAGCTTCAATATCTTCATTTGTACAACAACAGTCTCAGGGGTAACATCCCCTATCACCTCACAAATCTCCCAAAACTATGGTACCTAGACCTTGGATCAAACTACATTACATCTCCTCCAAATTGGTCCCAATATTCATCTATGTCTTCTTTGACCCACCTCAGTTTGGCTATCAATGATTTCAATTCTGACTTCCCTAGTTTTGTAATGGATTGCCAGAATTTGACATATCTTGACTTGTCTCAAAATCCTCTAAGCCCAATACCAGAATCATTGTATACCAGTCTGGGAAAGCTTGAATACCTGAATCTCACCAATTGTGCGCTAGATGGACCATTGCCATCAAACTTTCCCAAGCTTTCTAACCTGAAAGAACTCCGCCTGGGTCATAACAAGTTTACTGGTCCCATTCCTCCGTCTTTAGGATTAATATCAGGACTTCAGATTCTTGAATTGAATGAGAACGTACTTCATGGGGAAATTCCTGCCTCTTTAGGCGAACTCAGGGAGCTTCGGTGTCTTGCTCTCGAAAGAAATTTTTTGAATTCTACTCTCCCTACAGAGCTTGGGTTCTGTACTAACCTGACCTACCTGAGTTTAGCAGTAAATAGTCTGACAGGTCCCTTGCCTTTGTCGCTATCCAATCTGACCAAAATAACAGATTTGGGGTTGTCCGATAATTTTTTTACAGGTCAGCTTTCTTCTTCATTGATCTCTAATTGGACTGAGTTAGTCTCTCTGCAACTTCAAAACAATACATTCACAGGTGAAATTCCTGAAGAGATCGGCTTCTTGACAAAAATACACTACCTCTACCTGTACCGTAATCACTTCTCTGGCCCCATTCCTGTAGGGATTGGAAACTTGAAAGCTATGATAGAATTAGACCTTTCAGGAAATCAATTATCTGGTCCAATTCCTTCTAGCATATGGAATCTTACAAACATTCAAGTCATACAACTTTTCTTCAATAATCTCTCTGGAAGCATTCCCACGGATATTGGAAACTTGTCCTCACTACAAATTTTCGATGTCGACACTAATTTTTTGCATGGAGAGTTGCCAGAGACCATATCTCAGCTAACTCAGTTAACATCATTTTCGGTACTCAGTAATAATTTTTCAGGTACCATTCCCAGAGCTTTTGGGCACAATAATCCAAATCTAACTCATGTTAGGCTTTCAGACAACAGCTTCTCTGGAGAACTGCCACCTAATTTATGCAGTGGATTCGTACTGGAAAATCTGTTGGTGAATAACAATAGCTTTTCTGGGCTACTACCAAAGTGCTTGAGAAATTGTTCACGGCTAACTAGAGTTCGGCTTGATAGAAATCAATTCACTGCAAATATCACAGAAGCATTTGGGGTTCACCCAAAACTTGATTTCATCTCAATTAGTGGCAATCAGTTTTTTGGTGAGCTTTCTCCTGAATGGGGTGAATGTGTAAACTTAACCAGAATGCAGATGGATAGGAACAAACTTTCTGGAAAAATTCCACCTGAGCTGGGTAAGTTGAAAAAATTACAATATCTAAGCCTGCAGTTTAATGAGTTCACCGGCAATATTCCTCCTGAACTGGGAAATCTTAGCCGGCTGTTCATGTTCAACTTGAGCAACAATCGTTTGACAGGAGATATCCCAAAGAGTATCGGGAAATTAGTTGAGCTTAGAAATCTTGACTTATCAGATAACAATTTTACCAAAAGCATACCAGTACAACTCGGTAAATGTCAAAAGTTGCAGAGCTTGAATTTGAGCTACAATAATTTATCTGGTGAAATACCATCAGAACTCGGCAATCTGTTCTCACTAAACGACTTGTTGGACCTCAGGAGCAATGCTCTTTCAGGGCAAATTCCTCAAAACCTTCAAAAACTTACTTCTTTGCAGATCCTCAATGTCTCACATAACCATCTTTCAGGAGAAATCCCACAACCCTTTTCAGGCATGCTCAGTCTTCAATCTGTTGATTTTTCCTACAACAACTTGACAGGCTCAATCCCAACTGGCAGCATTTTCCAAAAAGCACCTACTGGAGCTTATGTTGGGAACTCAGGCTTGTGTGGGGAAGCAGAAGGTTTAACTCGTTGCTCTACAGCATCTTCTCCAGACAAGTCAAAAGGGTTAAACAAAAGGGTTCTTCTTGGTGTTATTATGCCTGTTTGTGTGCTATCAATAATGGGGATAATTGTCGTCGGAATTCTAGTATTCCGTAGGCACAACAAACTCTCTGACGAAGAGAAGAGAGGTACTGAAAAGAATGACCAATCTAATAGAATGGTATGGGGAAGAGATAGAAAATTCACATTTTCAGAAATTGTCATGGCCACAGATAACTTCAATGACAATTACTGCATTGGAAAAGGAGGATTCGGAAGCGTCTACAGGGCAGAATTATCCACAGGTCTAGTCGTTGCAGTCAAGAGGCTGAATTTGACAGATTCAAGTGACATCACGGTAACAAATCGCCAGAGCTTTGATAATGAGATTAGAACTCTTACAGAAGTGAGGCACCGCAACATAATAAAGTTTTATGGGTTCTGTTCCAACAGGGGACGCATGTACCTGGTTTATGAACACATTGACAAAGAGTTAGCACAAACAATGAAGGTCACAGAAAAGTGCGATGTGTACAGCTTTGGAGTGGTGGCACTGGAGATAATGATGAGGAAGCACCCAAGGGATCTGTTGGCTTCTCTATCTTCTTCAACGCAGGATTCGCAGATTCTTCTGAAGGATGTGTTAGATCAAAGGCTTCCACCTCCGAATGGGAGATTAGCTAAAGCAGTAGCATTCGTAGTAGCAATAGCTTTGGCATGCACGCACAACGCTCCAGACTCAAGACCCACCATGCGTTCTGTGGCACAAGAGCTATCAGCTGGCAAATCGGCTCATTTCTCAGAGCCCTTTGGCATGGTTACCGTTACGAAGCTAATAGGGTTTCAGAAATAA 3396 0.4149 MIAIQKASVLLVHILLLSFLPSQIKASPRTEAKALVKWKNSLPLPLPASLNSWSLTNVSNLCSWDAIICDSNNTTVWEINLFGANLNGTLIGLEFSFLPNLTRLNLNTNNFNGAIPSAIGNLSRLNFLDLGNNLFEDTLPSQLGQLRELQYLHLYNNSLRGNIPYHLTNLPKLWYLDLGSNYITSPPNWSQYSSMSSLTHLSLAINDFNSDFPSFVMDCQNLTYLDLSQNPLSPIPESLYTSLGKLEYLNLTNCALDGPLPSNFPKLSNLKELRLGHNKFTGPIPPSLGLISGLQILELNENVLHGEIPASLGELRELRCLALERNFLNSTLPTELGFCTNLTYLSLAVNSLTGPLPLSLSNLTKITDLGLSDNFFTGQLSSSLISNWTELVSLQLQNNTFTGEIPEEIGFLTKIHYLYLYRNHFSGPIPVGIGNLKAMIELDLSGNQLSGPIPSSIWNLTNIQVIQLFFNNLSGSIPTDIGNLSSLQIFDVDTNFLHGELPETISQLTQLTSFSVLSNNFSGTIPRAFGHNNPNLTHVRLSDNSFSGELPPNLCSGFVLENLLVNNNSFSGLLPKCLRNCSRLTRVRLDRNQFTANITEAFGVHPKLDFISISGNQFFGELSPEWGECVNLTRMQMDRNKLSGKIPPELGKLKKLQYLSLQFNEFTGNIPPELGNLSRLFMFNLSNNRLTGDIPKSIGKLVELRNLDLSDNNFTKSIPVQLGKCQKLQSLNLSYNNLSGEIPSELGNLFSLNDLLDLRSNALSGQIPQNLQKLTSLQILNVSHNHLSGEIPQPFSGMLSLQSVDFSYNNLTGSIPTGSIFQKAPTGAYVGNSGLCGEAEGLTRCSTASSPDKSKGLNKRVLLGVIMPVCVLSIMGIIVVGILVFRRHNKLSDEEKRGTEKNDQSNRMVWGRDRKFTFSEIVMATDNFNDNYCIGKGGFGSVYRAELSTGLVVAVKRLNLTDSSDITVTNRQSFDNEIRTLTEVRHRNIIKFYGFCSNRGRMYLVYEHIDKELAQTMKVTEKCDVYSFGVVALEIMMRKHPRDLLASLSSSTQDSQILLKDVLDQRLPPPNGRLAKAVAFVVAIALACTHNAPDSRPTMRSVAQELSAGKSAHFSEPFGMVTVTKLIGFQK 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02688 1131 FunFam Leucine-rich receptor-like protein kinase family protein 384 479 - -
Bach1g02688 1131 SUPERFAMILY Protein kinase-like (PK-like) 906 1104 IPR011009 -
Bach1g02688 1131 FunFam Leucine-rich repeat receptor protein kinase MSP1 891 1008 - -
Bach1g02688 1131 Gene3D Ribonuclease Inhibitor 28 189 IPR032675 -
Bach1g02688 1131 Gene3D Ribonuclease Inhibitor 505 849 IPR032675 -
Bach1g02688 1131 SUPERFAMILY RNI-like 284 618 - -
Bach1g02688 1131 Gene3D Ribonuclease Inhibitor 190 282 IPR032675 -
Bach1g02688 1131 Gene3D Ribonuclease Inhibitor 385 504 IPR032675 -
Bach1g02688 1131 Gene3D Ribonuclease Inhibitor 283 384 IPR032675 -
Bach1g02688 1131 PANTHER LEUCINE RICH REPEAT KINASE 2 481 1011 - -
Bach1g02688 1131 ProSitePatterns Protein kinases ATP-binding region signature. 934 956 IPR017441 GO:0005524
Bach1g02688 1131 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 533 849 - -
Bach1g02688 1131 FunFam MDIS1-interacting receptor like kinase 2 193 383 - -
Bach1g02688 1131 SMART LRR_sd22_2 339 365 - -
Bach1g02688 1131 SMART LRR_sd22_2 701 722 - -
Bach1g02688 1131 SMART LRR_sd22_2 653 679 - -
Bach1g02688 1131 SMART LRR_sd22_2 436 462 - -
Bach1g02688 1131 SMART LRR_sd22_2 219 251 - -
Bach1g02688 1131 SMART LRR_sd22_2 170 191 - -
Bach1g02688 1131 ProSiteProfiles Leucine-rich repeat profile. 727 749 IPR001611 GO:0005515
Bach1g02688 1131 Pfam Leucine Rich repeat 724 741 IPR001611 GO:0005515
Bach1g02688 1131 ProSiteProfiles Protein kinase domain profile. 928 1131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g02688 1131 Gene3D Phosphorylase Kinase; domain 1 889 1008 - -
Bach1g02688 1131 Pfam Protein kinase domain 932 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g02688 1131 ProSiteProfiles Leucine-rich repeat profile. 221 242 IPR001611 GO:0005515
Bach1g02688 1131 SMART LRR_typ_2 436 460 IPR003591 -
Bach1g02688 1131 SMART LRR_typ_2 774 797 IPR003591 -
Bach1g02688 1131 SMART LRR_typ_2 219 242 IPR003591 -
Bach1g02688 1131 SMART LRR_typ_2 122 146 IPR003591 -
Bach1g02688 1131 SMART LRR_typ_2 726 749 IPR003591 -
Bach1g02688 1131 SMART LRR_typ_2 484 508 IPR003591 -
Bach1g02688 1131 SMART LRR_typ_2 701 725 IPR003591 -
Bach1g02688 1131 SMART LRR_typ_2 798 823 IPR003591 -
Bach1g02688 1131 SMART LRR_typ_2 170 192 IPR003591 -
Bach1g02688 1131 SMART LRR_typ_2 267 291 IPR003591 -
Bach1g02688 1131 SMART LRR_typ_2 534 557 IPR003591 -
Bach1g02688 1131 SMART LRR_typ_2 315 339 IPR003591 -
Bach1g02688 1131 SMART LRR_typ_2 98 121 IPR003591 -
Bach1g02688 1131 SMART LRR_typ_2 653 677 IPR003591 -
Bach1g02688 1131 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Bach1g02688 1131 Pfam Leucine rich repeat 197 256 IPR001611 GO:0005515
Bach1g02688 1131 FunFam Nuclear pore complex protein NUP107 28 188 - -
Bach1g02688 1131 Pfam Leucine Rich Repeat 776 797 IPR001611 GO:0005515
Bach1g02688 1131 Gene3D Transferase(Phosphotransferase) domain 1 1009 1108 - -
Bach1g02688 1131 SUPERFAMILY RNI-like 519 817 - -
Bach1g02688 1131 SUPERFAMILY L domain-like 51 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02688 Bach-Chr1 37659367 37663135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02688 31 671 Receptor kinase-like Gene Family AT4G08850 32.298 1.35e-82 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bach1g02688 Pkinase 7.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02688 - - qsa:O6P43_006856 1404.04