Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02677 CAATCACAAAACCCACACCCTTTTCTGATCTTTTTCTCTAACTTATCTTCCAATTAATCCACTCCTGCATAGTTTTTTCCACGATTCTTCTTCTTCTTCTTCTTCAACATTTCTTGTGAGTCTGAAAGCAGAGTTCGATGCAGGGTGCTCGTGGCAGCGTTGGATCATTTTCCGGTGATTCTGATATGTCAACAGTGTCTAACGATCATAACTTGGTCCTCTCTTCGGAGGACTCTTCATGCCCGGATGAGTCTGACCTTGAATTGGGTCTTGGATTAAGCCTTTCTCGTCCTTGTGCAAAGTCCCACCCTACTTCAACTACTCAATATGCAAGAATTCTGACTGCTGAGGGTTTTCCTTCTGCAGTTTCTTCTACTCCTGCGTCTTCAACTTCCTCCTCGTCTTCATCTTCTACTCCTTCTTCATTGAGTAGGGCTAACGTCACAGCTGGTACTAAGAGAACTGCTGATTCCGTTGTCGCCAATAACGGTCCCAGTCAGGTCGTAGGATGGCCTCCCCTGAGAGCATATAGAATGAATAGCTTCAACAACCATGGAAAATCACCTGCTTCTGAAGCATGCAACTCAATGGTTGAAAAAAGTAAGAGGAGTAATGCTGTAGTGAGAAACATTACTGACAACGGCGGTGAAAAAAACACTAGTACCAAAGATAAAGGACACCCCAGGAGTTCCCTGTTTGTGAAGGTTAATATGGATGGGGTAGCAATTGGAAGGAAGGTTGATTTGAGTGCTCAAAGTTCCTATGAAACCTTAGCACGAACTTTGGAGGATATGTTTAGTGAGCCTACTACCGGCATTACTTGCAATAGATCAAATGGGAAGGATGTTGGAGCAGAAAGACAGTCTAAGTTGCTTGACGGATCTTCCAAGTTTGTGCTCACTTATGAAGACAAGGAAGGAGACTGGATGCTTGTTGGGGATGTTCCTTGGAGGATGTTCCTTAGCTCTGTGAAGAGACTAAGAATCATGAGGACATCAGACGCTAATGGACTTGCACCAGGGTTGGAAGAAAAGAACAGCAGACAGAGAAGCAAGCCCATATAGATTTGGTTTGCATGCCACTGTGGAAAGAATTTTTGGCTTGACACTTAAAACAAAATACATGAATAGAAGAGGGGAAACATATTAAAAGGGATACTGTAAGTCAATGAATTTTAGGAATTAACTATCAAAACACAGCTTTTTTGTTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAATTTTGTTCATTTAATTTGTCGCTGTCTCTCTCCATTTATCTTCACCTGTCATGGAGGGCGCCGGCATCATAGGTTGTCATATA 1328 0.4179 MQGARGSVGSFSGDSDMSTVSNDHNLVLSSEDSSCPDESDLELGLGLSLSRPCAKSHPTSTTQYARILTAEGFPSAVSSTPASSTSSSSSSSTPSSLSRANVTAGTKRTADSVVANNGPSQVVGWPPLRAYRMNSFNNHGKSPASEACNSMVEKSKRSNAVVRNITDNGGEKNTSTKDKGHPRSSLFVKVNMDGVAIGRKVDLSAQSSYETLARTLEDMFSEPTTGITCNRSNGKDVGAERQSKLLDGSSKFVLTYEDKEGDWMLVGDVPWRMFLSSVKRLRIMRTSDANGLAPGLEEKNSRQRSKPI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02677 308 ProSiteProfiles PB1 domain profile. 185 288 IPR000270 GO:0005515
Bach1g02677 308 MobiDBLite consensus disorder prediction 1 42 - -
Bach1g02677 308 FunFam Auxin-responsive protein 180 296 - -
Bach1g02677 308 MobiDBLite consensus disorder prediction 1 34 - -
Bach1g02677 308 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 40 290 IPR003311 GO:0005634|GO:0006355
Bach1g02677 308 MobiDBLite consensus disorder prediction 75 124 - -
Bach1g02677 308 MobiDBLite consensus disorder prediction 75 119 - -
Bach1g02677 308 MobiDBLite consensus disorder prediction 289 308 - -
Bach1g02677 308 SUPERFAMILY CAD & PB1 domains 182 284 - -
Bach1g02677 308 Pfam AUX/IAA family 67 294 IPR033389 -
Bach1g02677 308 MobiDBLite consensus disorder prediction 141 171 - -
Bach1g02677 308 Gene3D - 180 298 - -
Bach1g02677 308 MobiDBLite consensus disorder prediction 141 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02677 Bach-Chr1 37574313 37577419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02677 189 294 B3 DNA Binding Superfamily AT1G59750 33.962 1.95e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bach1g02677 AUX_IAA 2e-62 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02677 K14484 - gmx:100779400 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00665 8 4368397 4371232 Bach1g02677 1 37574313 37577419 BWGD
Bach1g02677 1 37574313 37577419 Bach1g02677 1 37574313 37577419 ECH