Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02643 ATGAATCACTGTGTTCCAGATTTCGGAATTGAAATGGAAGATGATGAGTACCCAATACCCACCTCTTCTGGGTTTACACGCCTAAACAAACCCTCCGTGTTAGACGACGATATCATCGAGTTGTTATGGCAAGACGGCCAGGTGGTGATGCAGAGTCAGAACCAACGATCCGTTAAAAAACCACCCCCGGCGGGGCCCTCCACGGCGAGGGAGATTCGGTCCTCACAACCAGAAGCAGAAAACGATAACAATCAACATCTATTTATGCAAGAAGATGAAATGACTTCCTGGCTTCACTATCCCATCGTTGATGAGAATCCCTTGGATCAAAATTTTTGCGCCGACTTACTCTATCCTCCGTCCACCACTGTTAACGACAACAGTGCCATGCAGACCCCTGCTCGTACGTCTCAGATAACGGATCTCCGGCAGCCGCCAAGGTCGGTGGCTCCACTCCCGCCAATACAGCCCACGGGGAGAACGGGGCAGGTACAGACGAGGATTCAGAACTTCGCTCATTTCTCGAAGCACAATGCAAGAGTTCAACCAGGGCCGTCAAGTTTGAAGCCGGAAGCGAGGGAATCAACGGTGGTAGATTCAAGCATCATGACGGATGTCGCGGCGGATTCCATGGCATCGGATACTGTAACATACACGGCGGAGCCAACGGACAAAGATGGCGGCCGCGGGAGCATGAGCAATGCTGGAATAGCAACACCTTCCGCCGGCGGATCAACAGGAGGGAAGGAAGTGATGAAGTGCGATGTGACAGTGACGTCATCACCGGGAGGTTCAAGTGGCAGCGCTGAAGCGGCTCACCGAACGGCGGCGGAGGATCGAAAGCGGAAGGGTCGGGAACCCGACGACTCCGAGTGTCAAAGCGAGGATGTTGATTTTGAATCTGCGGATGCAAAGAAACAAGTTCGTGGATCAACTTCTACGAAGAGATCTCGTGCTGCAGAGGTCCATAACCTCTCAGAGAGGAGGCGTCGAGATAGGATAAATGAAAAGATGAAAGCTTTGCAAGAACTTATACCTCGGTGCAATAAGTCTGACAAAGCTTCAATGCTGGATGAGGCCATTGAGTACTTGAAGTCACTGCAGTTACAAGTGCAGATGATGTCCATGGGATGTGGCATGGTCCCTATGATGTTTCCGGGAATTCAACAGTATATGCCACCAATGGGAATGGGGATTGGGATGGGTATGGGCATGGAAATGGGCATAAACCGACCATTAATGCCAATTCCCAATATGTTAGCTGGTTCGGGTTTGCCTGCAGCCACTTCAGCTGTTCATTTGGGACCAAGGCTCCCTATGCCTCCTTTCCACATGGCTCATGTTCCTGCACCTGATTCCTCCAGAATGCAAGCACCGCAGCCGTCAGATCATATGTTTACATCACCTGGGGGACCTGATCCTAATCAGTCATGGATCCCAAATTTCACTGATCCTTATCAGCAATACCTTGGTCCCCACCAGATGCAGTTACAATTAATGCAGGCAATAAACCAAGCAAATGACTGCAAGCCAAGTAGCAGCAGGGGCCAGGACAATCCAGAAAATCATCATTCAGACGACTTCTATGCTGTTCCCGGGTCTGTTCTTCGACGTGGAAGAGGAAGCATATTGATAGCACCAATACAAATGAATAACCACCCCTTTCAGATCTTTCTAAGATTCGCTTCAGACGTGTTCTGTGGACGTTACAGTAGCCTCTTAGCTTTATCTTGA 1734 0.5 MNHCVPDFGIEMEDDEYPIPTSSGFTRLNKPSVLDDDIIELLWQDGQVVMQSQNQRSVKKPPPAGPSTAREIRSSQPEAENDNNQHLFMQEDEMTSWLHYPIVDENPLDQNFCADLLYPPSTTVNDNSAMQTPARTSQITDLRQPPRSVAPLPPIQPTGRTGQVQTRIQNFAHFSKHNARVQPGPSSLKPEARESTVVDSSIMTDVAADSMASDTVTYTAEPTDKDGGRGSMSNAGIATPSAGGSTGGKEVMKCDVTVTSSPGGSSGSAEAAHRTAAEDRKRKGREPDDSECQSEDVDFESADAKKQVRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGIQQYMPPMGMGIGMGMGMEMGINRPLMPIPNMLAGSGLPAATSAVHLGPRLPMPPFHMAHVPAPDSSRMQAPQPSDHMFTSPGGPDPNQSWIPNFTDPYQQYLGPHQMQLQLMQAINQANDCKPSSSRGQDNPENHHSDDFYAVPGSVLRRGRGSILIAPIQMNNHPFQIFLRFASDVFCGRYSSLLALS 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02643 577 SMART finulus 324 373 IPR011598 GO:0046983
Bach1g02643 577 Pfam Helix-loop-helix DNA-binding domain 322 368 IPR011598 GO:0046983
Bach1g02643 577 MobiDBLite consensus disorder prediction 137 160 - -
Bach1g02643 577 MobiDBLite consensus disorder prediction 455 474 - -
Bach1g02643 577 FunFam Basic helix-loop-helix transcription factor 313 376 - -
Bach1g02643 577 MobiDBLite consensus disorder prediction 452 474 - -
Bach1g02643 577 MobiDBLite consensus disorder prediction 177 198 - -
Bach1g02643 577 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 321 396 IPR036638 GO:0046983
Bach1g02643 577 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 318 367 IPR011598 GO:0046983
Bach1g02643 577 PANTHER TRANSCRIPTION FACTOR PIF3 26 469 IPR044273 GO:0003700|GO:0006355
Bach1g02643 577 CDD bHLH_AtPIF_like 318 381 IPR047265 -
Bach1g02643 577 Gene3D - 313 376 IPR036638 GO:0046983
Bach1g02643 577 MobiDBLite consensus disorder prediction 51 82 - -
Bach1g02643 577 Coils Coil 324 344 - -
Bach1g02643 577 MobiDBLite consensus disorder prediction 273 290 - -
Bach1g02643 577 MobiDBLite consensus disorder prediction 506 528 - -
Bach1g02643 577 MobiDBLite consensus disorder prediction 213 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02643 Bach-Chr1 37292100 37299163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02643 1 373 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G20180 42.159 8.08e-69 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach1g02643 HLH 7.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02643 - - pcin:129287665 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00688 8 4597891 4609580 Bach1g02643 1 37292100 37299163 BWGD
Bach1g02643 1 37292100 37299163 Bach1g02643 1 37292100 37299163 ECH