LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach1g02637	ATGGCGGCGTCGAAGCGCCTCCGGGACCTGCAATCCCAAGCGGGGAACAAGATCTGCGTTGATTGTTCCCAGAAGAACCCTCAATGGGCTTCCGTTTCCTATGGAGTTTTCATGTGCTTGGAGTGCTCCGGCAAGCACCGTGGGCTTGGTGTACATATCTCCTTCGTTCGATCCGTCACCATGGATTCGTGGTCCGAAACCCAGATCAAGAAAATGGAAGCTGGAGGTAATGAACAGCTCAACACCTTCCTTGCTCAGTATGGGATCCCCAAGGAGACCGATATTGTTACAAAGTATAATAGCAATGCTGCCAGCGTATATAGGGATCGAATTCAGGCCCTTGCCGAGGGTCGACCATGGCGGGATCCACCAGTCGTCAAGGAGAACCTTGGTTCTGGCAAAAGTAAGCCCCCATTGGCACAAAGCAGTGCCAGGACTAATGGAGGGTGGGATAATTGGGATAACGATGATGGGTTCAGATCGCCTAATGATATCAGGCGAAACCAGTCGACGGGGGATTTTAAGGGGTTGAATGGTGGCGGCGCCGGAGGCAGTCCCGCCAGATCAAGGTCCACTGAGGATATCTATACGCGCTCACAATTGGAGGCCTCTGCTGCTAATAAGGAGAGCTTTTTCGCTCGGAGGAGGGCCGAAAACGAATCACGACCTGAAGGGATTCCACCCTCACAAGGAGGCAAATTTGTCGGCTTCGGGTCTTCTCCAGCGCCTTCCCAGAGGAATAATAATCCACAAAATGATGTTTACTCAGCTGTTTCTCAGGGATTCGGGAAATTATCTATAGTTGCAGCATCTGCAGCCCAGTCTGCTGCTAATGTTGTTCAACAAGGCACTAAGGACATCACTGCTAAGGTAAGAGATGGTGGTTATGACCACAAGGTCAATGAAACTGTCAATGTTGTCACCCAGAAGACATCGGAGATTGGACAAAGGACATGGGGGATCATGAAAGGGGTCATGGCTTTGGCTTCACAGAAGGTTGAAGAATACACTAGAGAAAACTCAAATTGGAAGCCTGATAATTGGCAACAAAATGAAAGTGGTAGAAATGGTTACTATCAGGATTTCAATCAAGATAATAAAGGCTGGAATTCTTCTACCAGCAGAGGGCAGTCTTCATCAAGTGGGCAGTCTAATACTTACAGCTCAAGCTCTTGGGATGATTGGGACCACAAAGATGCTAGGAAGGAAGAACCAGCAAAAGGATTAGGTTCCCATTCATCAAGTGGGCGGTTCAATACTCACAACTCCAGCCCCTGGGATGATTCGGACCACAATGATACTAGGAAGGAAGAACCAGCTAAAGAATCAGCTCCTCGTAATAGTGATGCTTGGGCTGGTTGGGAAGATGCCAAAGATGATGGATATGATGATGTCTATGACAATGCATCTAATAAAAAAGCTGTTGGTTACAATGGGAAATCGGATGCTACCTGGACAGGAGGAGGCTTCCTCTAAGGTTTGCAAATATTATTTGCCTGGCCAGGTTTAGTCGTATCTCTACATTGATTTTGCCTCAAGTGACAAAATATTGTAGCTTAC	1560	0.4769	MAASKRLRDLQSQAGNKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSETQIKKMEAGGNEQLNTFLAQYGIPKETDIVTKYNSNAASVYRDRIQALAEGRPWRDPPVVKENLGSGKSKPPLAQSSARTNGGWDNWDNDDGFRSPNDIRRNQSTGDFKGLNGGGAGGSPARSRSTEDIYTRSQLEASAANKESFFARRRAENESRPEGIPPSQGGKFVGFGSSPAPSQRNNNPQNDVYSAVSQGFGKLSIVAASAAQSAANVVQQGTKDITAKVRDGGYDHKVNETVNVVTQKTSEIGQRTWGIMKGVMALASQKVEEYTRENSNWKPDNWQQNESGRNGYYQDFNQDNKGWNSSTSRGQSSSSGQSNTYSSSSWDDWDHKDARKEEPAKGLGSHSSSGRFNTHNSSPWDDSDHNDTRKEEPAKESAPRNSDAWAGWEDAKDDGYDDVYDNASNKKAVGYNGKSDATWTGGGFL	491

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach1g02637	491	Pfam	Putative GTPase activating protein for Arf	5	106	IPR001164	GO:0005096
	Bach1g02637	491	PANTHER	ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED	1	411	IPR044519	GO:0005096\|GO:0016192
	Bach1g02637	491	SMART	arf_gap_3	1	120	IPR001164	GO:0005096
	Bach1g02637	491	PRINTS	HIV Rev interacting protein signature	56	77	IPR001164	GO:0005096
	Bach1g02637	491	PRINTS	HIV Rev interacting protein signature	16	35	IPR001164	GO:0005096
	Bach1g02637	491	PRINTS	HIV Rev interacting protein signature	35	52	IPR001164	GO:0005096
	Bach1g02637	491	FunFam	ADP-ribosylation factor GTPase-activating protein	1	129	-	-
	Bach1g02637	491	Gene3D	Arf GTPase activating protein	1	126	IPR038508	-
	Bach1g02637	491	MobiDBLite	consensus disorder prediction	118	194	-	-
	Bach1g02637	491	MobiDBLite	consensus disorder prediction	392	408	-	-
	Bach1g02637	491	MobiDBLite	consensus disorder prediction	215	250	-	-
	Bach1g02637	491	MobiDBLite	consensus disorder prediction	135	150	-	-
	Bach1g02637	491	ProSiteProfiles	ARF GTPase-activating proteins domain profile.	4	120	IPR001164	GO:0005096
	Bach1g02637	491	MobiDBLite	consensus disorder prediction	342	391	-	-
	Bach1g02637	491	SUPERFAMILY	ArfGap/RecO-like zinc finger	4	116	IPR037278	-
	Bach1g02637	491	MobiDBLite	consensus disorder prediction	338	463	-	-
	Bach1g02637	491	CDD	ArfGap_ArfGap1	3	117	-	-
	Bach1g02637	491	MobiDBLite	consensus disorder prediction	424	444	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach1g02637	Bach-Chr1	37239085	37242834	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach1g02637	5	91	C2H2 Transcription Factor Family	AT4G21160	47.727	4.35e-22	95.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach1g02637	K12492		-	gmx:100806519	723.391