Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02623 GTTCGTTGGAGGATTGGAGCTCAATAGTCTCAATTAAGTAGAAATGGCTTTCATCTCTGGAGTTCGGCGTTTTCTTCTCGATTCATCTGTTGCTTCGCCAATTCTTCGTTCCCAATTCATGTCGATTCGCCTCAGTTCAACTTTGACATCCCCGAAGCTTTTCATCAGCGGTCTGTCACGGCAGACAACAGATGAAAAACTGAGGGAAGCATTTGCTCCTTTTGGGCAGCTGGATGAAGCTAAGGTCATAAGTGATAGAGTCACTGGAAGATCAAAGGGATTTGCTTTTGTAACATATGCAACCGTAGAAGAAGCTGAAAAGGCCAGAGAAGGAATGAATGCCAAGTTTTTGGATGGATGGGTTATTTTTGTAGATCCTGCTAAACCGAGAGAGCCGAGACCTCCTCCGCAAGCACAGCCGCAGTCTTCTGAAACCGGCTTCACAGTTAACAAGACAATTGGATGGTGTGGTTGATTGTAGGATGGTTAATTTAAAGACTGCCATATATTCTTTTGGTCAATTTTAACTCAAAAGACTGTTGATTAAGTCAATTATATTACAATTGCTGGAGAAAATTTTGTATTGATCAGTCTGAAATCTTCATATTTTGGATTTCAACCATGTAAGATCCTGCTGCTTCAGAAAATTCTGATTCTGA 659 0.4112 MAFISGVRRFLLDSSVASPILRSQFMSIRLSSTLTSPKLFISGLSRQTTDEKLREAFAPFGQLDEAKVISDRVTGRSKGFAFVTYATVEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPPQAQPQSSETGFTVNKTIGWCG 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02623 143 Gene3D - 26 125 IPR012677 -
Bach1g02623 143 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 37 115 IPR000504 GO:0003723
Bach1g02623 143 MobiDBLite consensus disorder prediction 113 135 - -
Bach1g02623 143 SMART rrm1_1 38 111 IPR000504 GO:0003723
Bach1g02623 143 FunFam RNA binding protein 24 137 - -
Bach1g02623 143 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 39 105 IPR000504 GO:0003723
Bach1g02623 143 PANTHER NUCLEOLAR PROTEIN 8 27 142 - -
Bach1g02623 143 SUPERFAMILY RNA-binding domain, RBD 36 130 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02623 Bach-Chr1 37162136 37163996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02623 38 121 Eukaryotic Initiation Factors Gene Family AT1G49760 33.333 1.92e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02623 - - qsa:O6P43_006775 206.453