Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02612 ATTTTTCTTCTTTTCTATATTGCTGTTCAATTTCTTGTTTCTGGTTGCATATTTATCTCTCATATCGTGAATTGAATTTATCAAAAAATTTCCATGACTCACGACGAGATTTGTATCCATAAATAAATGGAGACGCAGCGGATCATCGAATTTCCTCATAAGAACATGGACAAGCGGCCCAGGAAGAGGCCTCGCTTAACATGGGATATGCCCCCTTATCTTCCTCCACCTCCCAAGGTTCTCCCTGCTATATATTGCAGCCAAGAGGTTGGGAATGGAGTTGTTCCAAATCATGCATATTCGTCCATGTTTTACAGGGGAGTGCCTCGGAATGGATCATCCCTTTGGAGACCTGATGATAAAGATGGACACTATGTTTTTGCTGTTGGGGAAAATTTAACTCCTCGATACCGAATTCTCAGTAAAATGGGTGAAGGGACTTTTGGCCAAGTATTGGAATGTTTTGACAATGAAAAGAAAGAAATGGTGGCAATCAAAATTGTCCGCTCCATACACAAGTATCGTGAGGCTGCAATGATTGAAATTGATGTCCTGCAGAGGCTTGCCAGGCATGATGTTGGTGGCACACGTTGTGTGCAAATACGGAATTGGTTTGACTATCGTAATCATATTTGTATTGTATTTGAGAAGCTTGGACCAAGCTTATACGATTTTCTCCGCAAAAACAGCTATCGTTCTTTTCCCATTGATCTTGTTCGGGAGTTTGGCAGACAACTTTTGGAGTCTGTAGCATTTATGCATGAGTTACGATTGATTCACACTGATTTAAAGCCAGAGAATATTCTTCTCGTTTCACCAGATTACATTACAGTTCCAGACTACAAGTTTCTAGCACGCACCACAAACACAAAAGATGGTTCCTATTTCAAGAACATCCCTAAGTCCAGTGCCATTAAGCTCATTGATTTTGGGAGTACAACATTTGAGCATCAAGATCACAGTTATGTCGTGTCAACAAGACACTATCGTGCACCAGAGGTTATCTTAGGTCTTGGATGGAATTATCCTTGTGACCTTTGGAGTGTGGGTTGCATACTCGTTGAACTTTGCTCTGGTGAGGCCCTTTTCCAAACACATGAAAACTTGGAACATCTTGCCATGATGGAGAGGGTTTTAGGCCCCCTACCCCATCATATGGTGGTCCGGGCTGATCGCAGGGCAGAGAAGTATTTTAGAAGGGGACCAGGGGGGGGTACACGATTGTGTTGGCCAGATAGTTCGACATCAAGAGAAAGCATGAGGGCAGTTTGGAAATTGCCTCGCTTGCCTAACCTCATAATGCAGCATGTTGATCATTCTGCTGGTGATTTGATCGACCTACTGCAAGGGCTCCTACATTATGAGCCTGTACAACGGCTCAAAGCAAGGGAAGCGCTAAGACATCCCTTCTTTACCAAAGATCCTAAAAGATATTGTTACCCGTTGGCGTTATAAGTACCCTACACATAAAATGGCATGGAAGAACAGGCTCAAGGTTGGCAATAAATAGCTTGAGCAACACAATATACATGTAATGTTTTGATATTGTAACCCAATGTATAGTGAATTGTATCCTGATTTGTACTCTGTGGTTTG 1596 0.4229 MDKRPRKRPRLTWDMPPYLPPPPKVLPAIYCSQEVGNGVVPNHAYSSMFYRGVPRNGSSLWRPDDKDGHYVFAVGENLTPRYRILSKMGEGTFGQVLECFDNEKKEMVAIKIVRSIHKYREAAMIEIDVLQRLARHDVGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREFGRQLLESVAFMHELRLIHTDLKPENILLVSPDYITVPDYKFLARTTNTKDGSYFKNIPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVVRADRRAEKYFRRGPGGGTRLCWPDSSTSRESMRAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLHYEPVQRLKAREALRHPFFTKDPKRYCYPLAL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02612 429 FunFam Serine/threonine-protein kinase AFC2 158 416 - -
Bach1g02612 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Bach1g02612 429 ProSiteProfiles Protein kinase domain profile. 82 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g02612 429 CDD PKc_CLK 69 416 - -
Bach1g02612 429 SUPERFAMILY Protein kinase-like (PK-like) 69 424 IPR011009 -
Bach1g02612 429 Gene3D Transferase(Phosphotransferase) domain 1 136 416 - -
Bach1g02612 429 Pfam Protein kinase domain 82 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g02612 429 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 46 421 - -
Bach1g02612 429 Gene3D Phosphorylase Kinase; domain 1 69 162 - -
Bach1g02612 429 SMART serkin_6 82 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g02612 429 FunFam Serine/threonine-protein kinase AFC2 69 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02612 Bach-Chr1 37078505 37082739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02612 82 422 Core Cell Cycle Gene Families AT1G76540 26.912 1.25e-30 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Bach1g02612 Pkinase 4.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02612 K08287 - zju:107432833 770