Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02604 ATGTTGTCTTTGCCGTACGCTAACGTCGACTTCAGCCTACGAGCTCTCTCTGGCCAGGCCGAAGGGTTTGGCCGCTTTGCGATCGGTGGGCTTCACGGTCCCATTCATAAAGTCACAACTGTAGCAGATGATGGACCAGGATCACTACGTGAAGCATGTCGTAGAAAAGAACCACTATGGATTGTCTTTGAAGTATCAGGAACTATTCATCTCTCGTCTTACTTGAGTGTGTCATCTTACAAAACCATTGATGGGCGTGGCCAAAGGATTAAACTCACTGGCAAGGGTTTGCGGCTCAAGGAATGTGAACATGTAATAATATGCAATTTAGAGTTAGAACGTGGTCAAGGACCTGATGCTGATGGCATTCAGATCAAACCTAATTCAAAGCACATATGGATAGATAGATGCAGTCTTCGTGATTTTGATGATGGACTGATAGATATCACCCGAGAAAGTACAGATATTACTATTTCTAGATGTCATTTTTCTCAGCATGACAAAACAATGCTCATTGGGGCAGATCCCTCTCACACTGGTGATAGATGCATCAGAGTAACTATTCACCATTGTTTTTTTGATGGGACCCGACAACGGCATCCTCGTGTTAGATATGCCAAAGTACATCTGTACAATAATTACACCAGAAACTGGGGCATATATGCTGTATGTGCTAGTGTGGAATCACAGATATACTCGCAATGTAATATCTATGAAGCAGGGCAGAAGAAGGTGGCATTCAAGTATCTTTCTGAAAAGGCAGAAGACAAGGAGGTGGCAGCAACTGGTCACATAAGATCTGAAGGAGACTTATTTGTAAATGGAACACAACATGGTTTAATGACTGAGAATGTTGGATGTGGCACTTTCCATCCTAGTCAATATTATCCCACATGGACAGTGGAGCCTCCCACACATGATCTGAAACAGGTTCTCCAGCACTGCACTGGATGGCAATCTGTTGCGCGCCCAGCAGATCAAGCAATGGTTGCATAG 996 0.4388 MLSLPYANVDFSLRALSGQAEGFGRFAIGGLHGPIHKVTTVADDGPGSLREACRRKEPLWIVFEVSGTIHLSSYLSVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLELERGQGPDADGIQIKPNSKHIWIDRCSLRDFDDGLIDITRESTDITISRCHFSQHDKTMLIGADPSHTGDRCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKVAFKYLSEKAEDKEVAATGHIRSEGDLFVNGTQHGLMTENVGCGTFHPSQYYPTWTVEPPTHDLKQVLQHCTGWQSVARPADQAMVA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02604 331 Gene3D - 7 315 IPR012334 -
Bach1g02604 331 SMART amb_all 66 244 IPR002022 -
Bach1g02604 331 SUPERFAMILY Pectin lyase-like 18 325 IPR011050 -
Bach1g02604 331 PRINTS Pollen allergen Amb family signature 19 36 IPR018082 -
Bach1g02604 331 PRINTS Pollen allergen Amb family signature 74 90 IPR018082 -
Bach1g02604 331 PRINTS Pollen allergen Amb family signature 221 240 IPR018082 -
Bach1g02604 331 PANTHER PECTATE LYASE 18-RELATED 12 278 IPR045032 GO:0030570
Bach1g02604 331 Pfam Pectate lyase 75 237 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02604 Bach-Chr1 36991571 36994029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02604 41 329 Polysaccharide Lyase AT3G55140 76.817 1.33e-172 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02604 K01728 - tcc:18597629 595.504