Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02568 ATGTTGGATCTTAATCTTAACGTGGGTTCCTGTGATTCTGCATCGGATTCCGTCGACTTGGTTTCTGGGAAGATTCTGCCACTTTCCGGTAGCCAAATGGATAGCTCTGGAAGCTTCAATTCCTCCGTCGTCAATGCTGATACCTCCACCAACACTTGTGAGGAAGATTCTTGCTCCTATGGCGATGCCTTTGCTTATAGCTTTGGCATACTGAAGAAGAATGCTGCAGATGATGGCACAAGCTCCAAAGCAGTTGAACTTCCCCAAGACGAAGGTGAAGATGGCTGCAATCGAACCATCCAACTTTTTCCAATGGCCAGAACCGAAGAAGCCGGTGTCACTGAGTTCGGCATCGCTCAGCAGTTTCCAGGTTCGTCCTTAGGTAAGGGGTGGTTGGATTTCTCGTCTAAGGAGGTCGGTGACGGTTTGGAACCGGAGCAGGGAATGTTACTCCAGCAGCAGAGACAGCAGGTAAAGAAGAGCCGGCGAGGACCGAGGTCTCGGAGCTCGCAGTATCGTGGTGTTACTTTTTATCGAAGAACAGGAAGATGGGAATCGCATATTTGCATATATGTCTGTGGGGTTTTTCTCTGTAATTTGGTTTTCAATATCAGGGCATATGATCGAGCCGCAATCAAGTTCCGTGGTATTGATGCAGATATCAATTTCAACATCAGTGATTATGAAGAAGATATTAAGCATATGAGCAATTTCTCAAAGGAAGAGTTTGTGCATATTCTGCGTCGGCAGAGCACGGGTTTCTCAAGGGGGAGCTCGAAGTACAGGGGAGTCACTCTGCATAAATGTGGACGATGGGAATCTCGTATGGGGCAGTTTCTGGGGAAAAAGTATATATATCTTGGACTATTCGATAGCGAAATAGAGGCTGCAAGGGCATACGATAAGGCTGCTATAAGGTGCAATGGGAGGGAAGCGGTTACAAACTTTGAGGCTAGCTCATATGAGGTGGGGAAAACTTCTGTGGATGGTAATGAAGATAGCAAGCAGAATCTTGATCTTGACTTGGGTATAGCTCCCCCTTCTGTCTCTGATGTTCAAGTGGAGAATATCCACAAAATGAGTGATTTCCAAGTTCAGCGTGGCTGGAATGACATGCATATTGATGGGACTGTTATGTCGTCCCATGGCTTCTCCATAGCTTCTGGGCATCCTTCTGTCTGGAGTGGTACCAATTTCTTTCCAATCTGTCAGGAAACAGCAATAGAGAAGAGGATGGAAGCTGATTCCTTGCCAAATTGGGCCTGGCAAATGCAAGGTCCTTACGGCGCGGAGACTCTGATTCCACCCTTCTCTGTTGCAGCATCATCAGGATTCCCTTCTCCATCAAGAATATTACCATCGGTTGCTGATAGTCAAATTCATTATCCAAACGTGACAACCCTCCACCCTCAATTTTCTCCATCAATCACTAACTCGAGCACCATATACCCTTTCCACTACAGGAGCTGA 1470 0.466 MLDLNLNVGSCDSASDSVDLVSGKILPLSGSQMDSSGSFNSSVVNADTSTNTCEEDSCSYGDAFAYSFGILKKNAADDGTSSKAVELPQDEGEDGCNRTIQLFPMARTEEAGVTEFGIAQQFPGSSLGKGWLDFSSKEVGDGLEPEQGMLLQQQRQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHICIYVCGVFLCNLVFNIRAYDRAAIKFRGIDADINFNISDYEEDIKHMSNFSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWESRMGQFLGKKYIYLGLFDSEIEAARAYDKAAIRCNGREAVTNFEASSYEVGKTSVDGNEDSKQNLDLDLGIAPPSVSDVQVENIHKMSDFQVQRGWNDMHIDGTVMSSHGFSIASGHPSVWSGTNFFPICQETAIEKRMEADSLPNWAWQMQGPYGAETLIPPFSVAASSGFPSPSRILPSVADSQIHYPNVTTLHPQFSPSITNSSTIYPFHYRS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02568 489 SMART rav1_2 171 230 IPR001471 GO:0003700|GO:0006355
Bach1g02568 489 SMART rav1_2 260 323 IPR001471 GO:0003700|GO:0006355
Bach1g02568 489 Gene3D AP2/ERF domain 259 318 IPR036955 GO:0003700|GO:0006355
Bach1g02568 489 SUPERFAMILY DNA-binding domain 259 318 IPR016177 GO:0003677
Bach1g02568 489 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 145 343 - -
Bach1g02568 489 CDD AP2 259 319 IPR001471 GO:0003700|GO:0006355
Bach1g02568 489 ProSiteProfiles AP2/ERF domain profile. 260 317 IPR001471 GO:0003700|GO:0006355
Bach1g02568 489 Pfam AP2 domain 259 308 IPR001471 GO:0003700|GO:0006355
Bach1g02568 489 PRINTS Ethylene responsive element binding protein signature 261 272 IPR001471 GO:0003700|GO:0006355
Bach1g02568 489 PRINTS Ethylene responsive element binding protein signature 299 319 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02568 Bach-Chr1 36788818 36791456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02568 156 343 AP2-EREBP Transcription Factor Family AT4G36920 71.429 6.34e-76 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bach1g02568 AP2 1.1e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02568 K09284 - qsa:O6P43_006713 609.372