Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02564 CTAAAGCTCTCAAACTCGCGCCAAATACAAATCCCATCACATCCCCAGGTTTCCGGCGAGGATGGCTGAAGGTCAGGCGAGTCCAGGCGGCGGTAGCCACGAAAGCGGTGAGCAGAGCCCTCGCTCTAATGTCCGTGAACAGGATAGGTACTTGCCGATCGCCAATATCAGCCGGATCATGAAGAAGGCGCTTCCCGCTAATGGAAAAATCGCCAAGGATGCCAAGGAGACCGTGCAGGAATGCGTCTCTGAGTTCATCAGCTTTATCACCAGCGAGGCGAGTGATAAGTGTCAGAGAGAGAAGAGGAAGACGATTAACGGCGACGATTTACTTTGGGCAATGGCGACTCTAGGATTTGAGGACTATATTGATCCCTTGAAGATTTACCTGGGCCGATACAGAGAGGGTGATACCAAGGGCTCAGCCAAGGGTGGAGATGCATCTGCTAAGAAAGACATTCAATCAAGTTCGAATGCTCAGCTTGCCCATCAAGGGTCTTTTTCGCAAGGTGTTACTTACACAAATTCTCAGCCTCAGGCTCAACATATGATGGTTCCTATGCAAGGCCCGGAGTAGATATAGACCGTCCTTCAATCGGTTGCATGATTTGAATGCCAGTGGAGATTTAGTAAGTACCCTCGGCATATTGGATGCATCCTTGTGTGAATATGACACTAGGGGCTGTTGATTATCGTATCCAGATTTTTTTTTATTAAGGCTTGTATATTATCTTTGGAGTAGAATTACTATTCCAAAGTTTTAACTGTAAATCCCGGGACCAAGTGTATGTCTGATTCGATCAGGCTTGGCAGACTCAATATTTTATGAAGTCATTGGAAACTAA 845 0.4663 MAEGQASPGGGSHESGEQSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLGRYREGDTKGSAKGGDASAKKDIQSSSNAQLAHQGSFSQGVTYTNSQPQAQHMMVPMQGPE 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02564 171 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Bach1g02564 171 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Bach1g02564 171 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Bach1g02564 171 MobiDBLite consensus disorder prediction 117 171 - -
Bach1g02564 171 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
Bach1g02564 171 SUPERFAMILY Histone-fold 27 149 IPR009072 GO:0046982
Bach1g02564 171 MobiDBLite consensus disorder prediction 1 29 - -
Bach1g02564 171 FunFam Nuclear transcription factor Y subunit B-3 19 144 - -
Bach1g02564 171 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 14 149 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bach1g02564 171 MobiDBLite consensus disorder prediction 130 163 - -
Bach1g02564 171 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bach1g02564 171 Gene3D Histone, subunit A 17 159 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02564 Bach-Chr1 36757721 36761452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02564 1 169 CCAAT-HAP3 Transcription Factor Family AT2G37060 79.213 2.29e-89 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bach1g02564 CBFD_NFYB_HMF 1.1e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02564 K08065 - zju:107432901 313.153