Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02561 ATGATAGGCGGAGGGTGTGAGTGTGAAAGACAGAGCTGGTTTTCGTACCGGAAATGTAGTTCTCGTTTCGAGTCATACAAACTTAAAATGACGCGTGGTGATACTGACAGTCAGGAGCATAGCTGCAGACGTCACGGTACCGGGAGCGCAAATCTATTAGCCGGAATCGCGATTTATGTAACTCCGGCTGAGATGCAGAGCATTGAGTACGGGTCCGGGGACCCAAGTGCCTTAATGGACATACTGGGTATTTACTTTCCCGAGCAGTTATTCCCAGTCGAAGACAGCTGGCTGAACCTCACTTCTGCCCTTGTTTCCTTCTTTTATTCTCCATTGGCCCAGAACTTCGCTTCCCAGGTAAAATATGATTATGGAAACTTTGTGTTGTCACTTGACTTCCAGCAATTCCAAAAAATATGCCATCTTGCAGAATTTTATGCAATGTTAGAGGAGAAACCTAAAATTGCTCTCTTATGCATGAGTGCTGCAGTTCACAAGGTTCTGATTACCAAATGGGAGAATGATAAGCTGGAGGCAGGTGCTAAAGTAAATATCCGTCTACATAACTGTCCTGAAACTATGATTGCTCTGAAGAACTTAAAAGCGGCTTATATTGACAAGCTCGTCTCAGTTCGTGGTACTGTTGTGAAAGTCAGCACTGTCAGACCTCTTGTGGTAGGAATGAGTTTCGAATGCGGAAAGTGTAAACAAAGCATTAGGCGCATATTTCCTGATGGAAAGTTTTCGCCCCCATCAACTTGCAATGTGCATGGCTGCAAGAGCAAAATTTTTATTCCATTGAGATCCACAGCTCAAACTATAGATTTTCAGAAGATAAGGCTACAAGAACTGCTAAAACCTGAAGATCACGAAGAAGGTCGGGTACCTCGAACAGTGGAATGTGAACTGGTCCAAGATCTCGTTGATGCATGTATACCCGGAGATGTGGTGACTGTTGCTGGAATTGTAAGAGGAATTAACACTTACATGGATATTGGAGGAGGGAAGTCAAAGAACAGAAACCAAGGATTTTACTATTTGTATCTTGAAGCTGTTTCCATAAAAAATTCTAAGTCACAGTCTATGCCTGAGGATGTGCAAGATTCTAACCCGAAGGCTAGACCTACTGAACTGTTTGATTTGTTTTCATTTTCTTCAAGAGACTTAGAATTTATTGTGAAGTTCTCAAAGGAATATGGTTCAGATTTGTTTCGGCAAATACTTCAATCTATATGCCCATCCATCTACGGGCATGAACTTGTTAAAGCTGGCATAACACTGGCTTTGTTTGGTGGCGTAAGAAAACATTCCACGGATCAGAATAAGGTTCCAGTGCGGGGAGATATTCATGTCATAATTGTTGGTGATCCTGGACTGGGTAAGAGCCAATTGCTACAAGCAGCTGCAGCTGTTTCTCCACGCGGTATCTATGTCTGTGGTAATGCCACAACCAGAGCTGGCCTCACTGTTGCTGTCGTGAAGGATCCTATGACAAGTGATTATGCTTTTGAGGCTGGTGCAGTGGTGCTGGCTGACAGTGGATTGTGCTGTATTGATGAGTTTGATAAAATGTCAGCCGAACATCAGGCCTTACTGGAGACAATGGAACAGCAATGCGTGTCTATTGCAAAGGCTGGATTGGTAGCAAGTCTATCAGCTCGAACTTCAATCTTAGCGGCAGCAAACCCAGCTGGTGGTCATTATAACCGTGCAAAAACTGTGAACGAGAATTTGAAAATGAGTGCTGCCCTCCTGTCTCGATTTGATTTGGTTTTCATACTGCTGGATAAACCTGATGAACTTCTGGACAAGCGATTATCAGAGCACATCATGTCACTTCATGCTGGGTCTGGACAACATTCACTAGCAGTAAAAAAGAGACGCGGAGATCTACCTTCTGATTCAAGAATTGAGGTAGCACAGAATGCTGAATGTGTAAATTTGGGTGGTAGATCCGGTTCTCTTGTTTCAAGGTTGAGACTTGACCCACAAAGGGACGGTGATTTTGTTCCATTACCTGGTCAACTTCTTCGCAAATACATCGCTTATGCAAGGAGTTTTGTCTTTCCTAGGATGTCCAAGCCAGCTGCAGAAATCCTACAAAAGTTTTACCTTAAACTGAGAGATCATAATACTTCAGCTGATAGTACACCAATAACAGCTAGGCAGCTGGAAAGTCTAGTTAGGCTGGCTGAAGCTCGAGCTCGGCTAGAGTTGAGAGAAGAAATAACAGCCCAGGATGCAATGGATGTTGTTGACATAATGAAGGAATCCCTGTATGATAAATACGTTGATGAGCATGGTTTTGTGGATTTTGGTAGAAGCGGGGGGATGAGTCAACAGAAAGAGGCAAAGCGCTTTCTCAGTTCTCTCAATAAGCAATCAGAACTGCTGCAGAAAGATTGCTTTTCGATATCTGAAATATATAGTCTGGCAGATAGGATTGGCCTCAAAGTTCCTGATATTGACACTTTCATCGATAATTTAAACAGCGTGGGTTATCTACTCAAAAAGGGGCCAAAGACATACCAGGTATTATCCTCCTCGTACACGCGAAGCCAATCATCAAGGAGATAA 2577 0.4323 MIGGGCECERQSWFSYRKCSSRFESYKLKMTRGDTDSQEHSCRRHGTGSANLLAGIAIYVTPAEMQSIEYGSGDPSALMDILGIYFPEQLFPVEDSWLNLTSALVSFFYSPLAQNFASQVKYDYGNFVLSLDFQQFQKICHLAEFYAMLEEKPKIALLCMSAAVHKVLITKWENDKLEAGAKVNIRLHNCPETMIALKNLKAAYIDKLVSVRGTVVKVSTVRPLVVGMSFECGKCKQSIRRIFPDGKFSPPSTCNVHGCKSKIFIPLRSTAQTIDFQKIRLQELLKPEDHEEGRVPRTVECELVQDLVDACIPGDVVTVAGIVRGINTYMDIGGGKSKNRNQGFYYLYLEAVSIKNSKSQSMPEDVQDSNPKARPTELFDLFSFSSRDLEFIVKFSKEYGSDLFRQILQSICPSIYGHELVKAGITLALFGGVRKHSTDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTRAGLTVAVVKDPMTSDYAFEAGAVVLADSGLCCIDEFDKMSAEHQALLETMEQQCVSIAKAGLVASLSARTSILAAANPAGGHYNRAKTVNENLKMSAALLSRFDLVFILLDKPDELLDKRLSEHIMSLHAGSGQHSLAVKKRRGDLPSDSRIEVAQNAECVNLGGRSGSLVSRLRLDPQRDGDFVPLPGQLLRKYIAYARSFVFPRMSKPAAEILQKFYLKLRDHNTSADSTPITARQLESLVRLAEARARLELREEITAQDAMDVVDIMKESLYDKYVDEHGFVDFGRSGGMSQQKEAKRFLSSLNKQSELLQKDCFSISEIYSLADRIGLKVPDIDTFIDNLNSVGYLLKKGPKTYQVLSSSYTRSQSSRR 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02561 858 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 128 795 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bach1g02561 858 FunFam DNA helicase MCM8 isoform X1 224 275 - -
Bach1g02561 858 SMART mcm 193 760 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bach1g02561 858 Pfam MCM OB domain 197 325 IPR033762 -
Bach1g02561 858 Coils Coil 518 538 - -
Bach1g02561 858 Gene3D - 197 326 IPR012340 -
Bach1g02561 858 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 413 765 IPR027417 -
Bach1g02561 858 PRINTS Mini-chromosome maintenance (MCM) protein family signature 446 461 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bach1g02561 858 PRINTS Mini-chromosome maintenance (MCM) protein family signature 506 520 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bach1g02561 858 PRINTS Mini-chromosome maintenance (MCM) protein family signature 557 569 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bach1g02561 858 PRINTS Mini-chromosome maintenance (MCM) protein family signature 533 546 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bach1g02561 858 PRINTS Mini-chromosome maintenance (MCM) protein family signature 584 592 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bach1g02561 858 Pfam MCM P-loop domain 401 614 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bach1g02561 858 CDD MCM8 407 758 - -
Bach1g02561 858 SMART AAA_5 447 599 IPR003593 GO:0016887
Bach1g02561 858 Pfam MCM AAA-lid domain 676 759 IPR041562 -
Bach1g02561 858 SUPERFAMILY Nucleic acid-binding proteins 125 327 IPR012340 -
Bach1g02561 858 Gene3D - 224 274 - -
Bach1g02561 858 ProSiteProfiles MCM family domain profile. 403 610 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bach1g02561 858 CDD MCM8_WHD 781 846 - -
Bach1g02561 858 Gene3D - 381 768 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02561 Bach-Chr1 36732520 36740400 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02561 74 846 Core DNA Replication Machinery Family AT3G09660 72.258 0.0 1161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02561 K10737 - gmx:100784549 1321.99