Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02557 ATGGCCAGTGATTCATCGTTTTTGTTCTCGGGCATTCGTTTTGATAGAAAGAGATTCGGCGCCGATATTGCCCGGTTCGAGAAAAAGGAGAATGATAAATCAGTGAATATTTCGAGCTCAGTTGAGGCTGAGAAAACCGAACCAGTAGAAGAGAAATCGTCTGTCAAGAAGAGGAAGCGGAAGGGAGCTGTTTCTGAAATGGTTGAAGGATTCAGCGTCTTCAAAAAATCAAAGTTAGCTGCACAAGCAAGAAATCAACCAAAAGATGAAGACGAGGCCGAAGATGAGTCCATCCAACGGAAGAAGGAACAGAATAGACAGCTTGAGCGGGATGCTATCTTCAGGAAAAAGCACAACATTCATGTATCCGGGTATAATGTCCCGTCACCGCTACAAAATTTTGAGGAGTTGAAGTCAAGATATGGATGTGAGTCATATTTGATACGCAATCTAGCCGAGCTTGGGTTCAGAGAACCAACACCCATCCAACGTCAGGCTATTCCAATTCTTTTATCTGATCGCGAATGCTTTGCTTGTGCCCCAACTGGCTCTGGAAAAACCTTGGCATTTGTATGTCCAATGCTTATGAAGCTTAAGTCTCCAGCAAAGGATGGTATTCGAGCTGTTATCCTGTGTCCTACCCGTGAATTATCTGCTCAGACATATAGAGAGTGTAAAAAGCTGGCTAAAGGAAAGAAATTTCATATCAAGTTGATGACAAAAGAGCTTGCAAGAAATGCTGATTTTTCCAAATTGCCATGTGATATACTTATATCCACTCCACTTCGATTACGCCTGGCTATCCGGAGGAAAAAGGTTGATCTGAGCAGGGTTCAATATCTTGTCTTGGATGAATCCGATAAGCTCTTTGAGGTTGTATTGTTCAAGCAGATTGATACTATAATTAAAGCATGCTCAAATCCCTCGATAATACGTTCACTGTTCAGTGCTACGTTACCTGATTTTGTTGAGGATCGTGCGCGGGAACTTATGCATGATGCTGTTCGTGTCATTGTTGGTAGAAAGAATACGGCATCTGAAACAATCAAGCAAAAATTGGTTTTTACTGGAAGTGAAGAAGGAAAGCTTATGGCAATTCGACAAAGCTTTGCAGAGAGTCTAAATCCTCCTGTATTGGTCTTTGTCCAAAGCAAGGAGCGAGCAAAGGAACTCTATGATGAACTTGCATTTGACAACATTAGAGTTGGTGTCATTCATTCTGACTTGTCTCAAAATGAGCGAGAAAACGCCGTTGATAACTTCAGAGCTGGCAAAACATGGGTTCTAATTGCTACTGATGTAGTTGCCCGTGGCATGGATTTTAAAGGCGTGAATTGCGTGATCAATTATGATTTTCCAGATTCTGCGGCTGCATACATCCACAGAATTGGTCGCTCTGGCAGAGCAGGGAGGATCGGAGAAGCTATTACTTTTTACACGGAGGAAGACATCCCATTCTTGCGGAATGTCGCTAATCTGATGGCAGCGTCAGGGTGTGAAGTTCCATCTTGGCTCACGGACTTGCGCAAAAAGAAATGGAAGAAACACCGACCCAAAAGAGATTCAATCTCAACCAAACCAAAAGATTAACGGCTGAGATGGGAGTTCATTCTAGCAACCAGATATTTTCTGGTGGGTTTCATTCCTTAACAGGCCAGGCAAGACATAAAATGAGAGCCCGAAATTTGTAGCTTTTCTAATAGAGTGAACATCAAATATATAGAATGAGGGTCTGAATTTGTAGCTTTTTTAATAGATTTTGATTGCCGGAAGAAAATTATATTCACAACATCCTTCTGAACAGTTAGGCCTTGAACTAGAAAATTTCG 1829 0.4188 MASDSSFLFSGIRFDRKRFGADIARFEKKENDKSVNISSSVEAEKTEPVEEKSSVKKRKRKGAVSEMVEGFSVFKKSKLAAQARNQPKDEDEAEDESIQRKKEQNRQLERDAIFRKKHNIHVSGYNVPSPLQNFEELKSRYGCESYLIRNLAELGFREPTPIQRQAIPILLSDRECFACAPTGSGKTLAFVCPMLMKLKSPAKDGIRAVILCPTRELSAQTYRECKKLAKGKKFHIKLMTKELARNADFSKLPCDILISTPLRLRLAIRRKKVDLSRVQYLVLDESDKLFEVVLFKQIDTIIKACSNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRKNTASETIKQKLVFTGSEEGKLMAIRQSFAESLNPPVLVFVQSKERAKELYDELAFDNIRVGVIHSDLSQNERENAVDNFRAGKTWVLIATDVVARGMDFKGVNCVINYDFPDSAAAYIHRIGRSGRAGRIGEAITFYTEEDIPFLRNVANLMAASGCEVPSWLTDLRKKKWKKHRPKRDSISTKPKD 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02557 529 CDD SF2_C_DEAD 349 479 - -
Bach1g02557 529 Pfam Helicase conserved C-terminal domain 372 470 IPR001650 -
Bach1g02557 529 CDD DEADc_DDX52 147 340 IPR044764 GO:0003724|GO:0005524|GO:0030490
Bach1g02557 529 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 348 509 IPR001650 -
Bach1g02557 529 Gene3D - 75 336 IPR027417 -
Bach1g02557 529 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 83 516 - -
Bach1g02557 529 SMART ultradead3 155 352 IPR014001 -
Bach1g02557 529 SMART helicmild6 389 470 IPR001650 -
Bach1g02557 529 Pfam DEAD/DEAH box helicase 160 324 IPR011545 GO:0003676|GO:0005524
Bach1g02557 529 Coils Coil 91 111 - -
Bach1g02557 529 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 136 164 IPR014014 GO:0003724
Bach1g02557 529 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 488 IPR027417 -
Bach1g02557 529 MobiDBLite consensus disorder prediction 30 63 - -
Bach1g02557 529 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 167 337 IPR014001 -
Bach1g02557 529 Gene3D - 337 514 IPR027417 -
Bach1g02557 529 MobiDBLite consensus disorder prediction 82 107 - -
Bach1g02557 529 MobiDBLite consensus disorder prediction 79 107 - -
Bach1g02557 529 MobiDBLite consensus disorder prediction 44 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02557 Bach-Chr1 36708507 36712735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02557 130 508 Eukaryotic Initiation Factors Gene Family AT3G19760 30.971 1.21e-54 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02557 K14779 - qsa:O6P43_006697 857.825