Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02542 TTCCTCTTCCGTGTTTAAGATCGTTTTTCCACCGGCGCCGCCCGTTCATTGAATCCCAAGATTAAACACCACATCTTGATATCCAGTGAACTCATAAGTCAATTAGTTGCCCTTCTTATTACTCCTGGGGTATTTTCTCGCATATTCTTGACAGTCGGACTAGAAGTCTCACTGGGTGGTCATTTTGTAGGCCTGGATCCTTTTTGCCCCATAAAGAATTGAATCGCTGATTGTGAAAACCAGTGAATGGTGGCGAGTTATTTGCGTCTCTGACTTATCTACACTGTTTATTTTGACTCTCGGGCTTGTAACCGACGGTTATGGGGCATAGACATATAACATCTCAAATGTCTGATAGTGAGCATGACCAGAATTGGAATCATATGCACACTGATCAACATTATGTTCACCTAGGTAGGACAAGCACTTTGGAGAATAATTCTTTCATTTATCCGGTGGAGAATATGTCTATAGATGGTATTCCTTTCACAACTTCATGGAACTCATCTACAAGGTTGAATAGATATCCATTTCCGAGTCTCAACATTGAAGTACCCCCTCATCAATCAGATGCATCAGTTGCTTCTCACAAACATTTTTTGCATTCATCAGATGCTGGAGCCTTTTTTGCCGCTTCTGAAAACTATACACACCCGCCTTCTTTTTCTAATTACGACAGACATGCATTTCATCCAGTTGATAGTGGTTTCATTGATCTGACAATGGGAAGTGAAGGAGGACCTCGCAAACGGAAGAGCCCTGGAATTCCTTCAGTCATTGAGAGAGGCAGTACAAGAAGATACTTCAATGCTGGAAATTCAACTGATCTTCCTATGTCTTCAGAATTACGGCAGGAGAAGCCAAGTATAGATTCTCATCATATGCCTTGGGATCATGTTACTATGACTCCCACATTCAGAGGCAATGACCTTTCAATCAGGGGTGAGGGTTCTTCAAGGAATGTGAGAAGCCGATCTGCACTTGATTTGGAATCCAACTTGGCCAGGACCTATTTATCCAGCAATCATTCACACAACTCCCACCCTACTGGTCCACCCATTGACCTCCCTAGCACAGTGGATCTTTCAGGTCCAAGTTCTAGCACTTCGACGAGGGATTGGAGCCAAATGAGCATATCTCCTGCTCATGGAAGGGCGATATTGTCAGAAACAAGTGGTTTTGGTCATGAGACTAGTCACTTTATTGTTGGAAATGGTTCTTCTAATGCTTCTGTAGATATCGGAGGTTATCATCATGAGTTTGGTACAAGCAGAAATTCTACTGTTCCTCAAAGTTTTCATGGTAATGTGACACAGTCTGCTAAGGGAGTTCGTAGTAACTATTCTCAAAGATTTACTCCAACTTTTAGGGCTTCTTCAAGCTTGCGCTTGGGACATGTGGTACCTTCAGATGATGGATTGCATATGGTAGCTGAAAGATACTCCTCTAGACATCCGAGGTCTCTGACGAGCATTGGCTGGCGAAACAGTGAGCGGAATGGGAGATCAAGGATATCTAGTGATAGATATCGATTGGCTGATGAGGCTGGTTTGCATGATCGGTTTTCTTCAGAGGGTGTTATGATTGTTGATCGCACATCATTTTATGGTTCTAGAAATATGTTCGATCAGCATAGAGACATGAGGATGGACATAGACAACATGAGCTATGAGGAACTACTTGCACTTGAAGAGAGGATTGGACATGTCAGCACTGGATTGTCTGACGACTTGATTTCCAAGTGTGTGACGGAAACAATATATTGTTGTTCATCGGAGCAAAATCAGGAAGAAGGAACATGTGTAATCTGCCTGGAAGAGTACAAGAACATGGACGATGTTGGGACTCTGAAAACTTGTGGTCACGACTACCATGTGAGCTGCATTAGAAAGTGGTTATCTATGAAGAACCTATGCCCTATCTGCAAAGCTTCGGCTATGGCTGATAATAATAAAAAATATGCAAATCTTCGTCAAGACTCTCACCGGCAAGACCATAACGCTGGAGGTGGAGGGAAGCAGATTTTTGCTAAAACCCTCAAAGCCCTCACTTTGAGCACTGGCAAGACTGTTGGAAGGAATTCTTCTGGCCGTATTACGGCTTTTCATCGTGGGGGTGGAGCCAAGCGATTGCAGCGAATAGTTGATCTCAAACGAAGCACCTCGTCTATTGGCATTGTAGAAAGGATAGAATACGACGCGAATCGTTCTTCTCGGATCGCTCTACTGCGATGGGTCGAGGGAGAGCAGCCACACAGTCAGAGGAAATGCGACACCATAAAGGATTTTGTTCCGCCGACTAAGATTCTCGAACCTAAAACGACCACCATCCGCGGCCAATTTGCTTTCTCTTTTCTGCCTGGGAAGGTGGAAGAAGGACAGGTAGTTTCCTTCTCTCCTGGGCTGACGGCGGGTTATAGAATGGTCGGCTTTCCAACCGGAACGCCTCCTTTGGTTAAAAGGCCCGTTATTAGTAAAATAACATGCGCGAAAGACGTTTTCTTATCTGCCTTCTCCTCTCCAAACGTCAAGGGAGAGACTGCAACGCTTTCTTTCCCAAGGGTTGCGGTGGCTGGGGCAAAGCCTGCTTTCTTCATTCCGCGACTGAGGGAGGAACTCAGTGGTGAAACCATGTTCTCTATTTCTGAGGTTCGAAAGTGGAAAACGAATAGCTCTTTTTGGGAACATAGGTTCAAACGTAAAGCGGCGCTTTCTTGGCAAAGTTTAAGACGGAAAGATACTTTAGGACTTGTTGGAGCTGCTGAGCATAACGAATCGAAGGCAAAGCTTGAAGTTGCCTGA 2801 0.4441 MGHRHITSQMSDSEHDQNWNHMHTDQHYVHLGRTSTLENNSFIYPVENMSIDGIPFTTSWNSSTRLNRYPFPSLNIEVPPHQSDASVASHKHFLHSSDAGAFFAASENYTHPPSFSNYDRHAFHPVDSGFIDLTMGSEGGPRKRKSPGIPSVIERGSTRRYFNAGNSTDLPMSSELRQEKPSIDSHHMPWDHVTMTPTFRGNDLSIRGEGSSRNVRSRSALDLESNLARTYLSSNHSHNSHPTGPPIDLPSTVDLSGPSSSTSTRDWSQMSISPAHGRAILSETSGFGHETSHFIVGNGSSNASVDIGGYHHEFGTSRNSTVPQSFHGNVTQSAKGVRSNYSQRFTPTFRASSSLRLGHVVPSDDGLHMVAERYSSRHPRSLTSIGWRNSERNGRSRISSDRYRLADEAGLHDRFSSEGVMIVDRTSFYGSRNMFDQHRDMRMDIDNMSYEELLALEERIGHVSTGLSDDLISKCVTETIYCCSSEQNQEEGTCVICLEEYKNMDDVGTLKTCGHDYHVSCIRKWLSMKNLCPICKASAMADNNKKYANLRQDSHRQDHNAGGGGKQIFAKTLKALTLSTGKTVGRNSSGRITAFHRGGGAKRLQRIVDLKRSTSSIGIVERIEYDANRSSRIALLRWVEGEQPHSQRKCDTIKDFVPPTKILEPKTTTIRGQFAFSFLPGKVEEGQVVSFSPGLTAGYRMVGFPTGTPPLVKRPVISKITCAKDVFLSAFSSPNVKGETATLSFPRVAVAGAKPAFFIPRLREELSGETMFSISEVRKWKTNSSFWEHRFKRKAALSWQSLRRKDTLGLVGAAEHNESKAKLEVA 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02542 826 Gene3D - 569 648 IPR012340 -
Bach1g02542 826 MobiDBLite consensus disorder prediction 136 220 - -
Bach1g02542 826 Pfam Ring finger domain 493 536 IPR001841 -
Bach1g02542 826 MobiDBLite consensus disorder prediction 253 271 - -
Bach1g02542 826 MobiDBLite consensus disorder prediction 233 271 - -
Bach1g02542 826 MobiDBLite consensus disorder prediction 160 175 - -
Bach1g02542 826 SMART Ribosomal_L2_2 585 655 IPR002171 GO:0003735|GO:0005840|GO:0006412
Bach1g02542 826 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 139 540 IPR045191 GO:0061630
Bach1g02542 826 MobiDBLite consensus disorder prediction 198 220 - -
Bach1g02542 826 SMART ring_2 494 535 IPR001841 -
Bach1g02542 826 SUPERFAMILY Nucleic acid-binding proteins 570 643 IPR012340 -
Bach1g02542 826 CDD RING-H2_RNF24-like 492 539 - -
Bach1g02542 826 FunFam Ribosomal protein L2 mitochondrion 569 652 - -
Bach1g02542 826 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 457 541 IPR013083 -
Bach1g02542 826 SUPERFAMILY RING/U-box 484 540 - -
Bach1g02542 826 FunFam E3 ubiquitin-protein ligase MBR2 isoform A 458 540 - -
Bach1g02542 826 ProSiteProfiles Zinc finger RING-type profile. 494 536 IPR001841 -
Bach1g02542 826 Pfam Ribosomal Proteins L2, RNA binding domain 585 643 IPR022666 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02542 Bach-Chr1 36629117 36635277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02542 1 546 C3H Transcription Factor Family AT2G37150 42.832 2.94e-110 346